Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|100427485|gb|BY977521.1|BY977521EST: GGTCTTCACAGACCCTTACAGATGACCATTGCCAGTACTTTATTTATCAG TTGTTGCGCGGTCTTAAATACGTTCATTCTGCCAATGTTCTACACCGCGAT
genomic: GGTCTTCACAGACCCTTACAGATGACCATTGCCAGTACTTTATTTATCAGgtgagagtga ... ttgtatgcagTTGTTGCGCGGTCTTAAATACGTTCATTCTGCCAATGTTCTACACCGCGAT
EST:
gi|162268678|gb|FC445175.1|FC445175EST: GGTCTTCACAGACCCTTACAGATGACCATTGCCAGTACTTTATTTATCAG TTGTTGCGCGGTCTTAA-TACGTTCATTCTGCCAATGTTCTACACCGCGAT
genomic: GGTCTTCACAGACCCTTACAGATGACCATTGCCAGTACTTTATTTATCAGgtgagagtga ... ttgtatgcagTTGTTGCGCGGTCTTAAATACGTTCATTCTGCCAATGTTCTACACCGCGAT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TGTGTATATTGTGTATGAGCTCATGGACACCGACCTTCATCAAATTATACGGTCTTCACAGACCCTTACAGATGACCATTGCCAGTACTTTATTTATCAGgtgagagtgactcgaccatgataggaccgcatttttgctttattgttttttattttatttgatttcgattatgttgtatgatgattgccgtctcctttgtttctgaccacgccatcatgtattcctcgccgctatcttgtatgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGATG