1 5' 3' | 2 5' 3' | 3 5' 3' |
gtttgtgtctaattccatcacttacacctccatgacttcctaatgacggtttagcttttagtgtggtaaattaagatgtaaataatgcgggtgtatgttttctgacgcgtaccgctcttcggaataggatctgtgacaattttcgaggcagttcatgttgttggttttgaatttttaccttactcgccatgcagGTTTTCTTTCACCGTCAACCTTACATACAGTCACAATTGAAAGCACAGAGAATGATGCCAATTGCTGGGCGACATGCAGCCTATCCCTGCATGCATGCAG
species | Physcomitrella patens |
transcript | PP1S207_1V6.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: CAAAGACGACGATGAGAAGTACGAATACAGAGCGACGTCATTTTCTGCAG GTTTTCTTTCACCGTCAACCTTACATACAGTCACAATTGAAAGCACAGAGAEST: gi|208362534|gb|DC939486.1|DC939486
genomic: CAAAGACGACGATGAGAAGTACGAATACAGAGCGACGTCATTTTCTGCAGgtttgtgtct ... cgccatgcagGTTTTCTTTCACCGTCAACCTTACATACAGTCACAATTGAAAGCACAGAGA
EST: CAAAGACGACGATGAGAAGTACGAATACAGAGCGACGTCATTTTCTGCAG GTTTTCTTTCACCGTCAACCTTACATACAGTCACAATTGAAAGCACAGAGA
genomic: CAAAGACGACGATGAGAAGTACGAATACAGAGCGACGTCATTTTCTGCAGgtttgtgtct ... cgccatgcagGTTTTCTTTCACCGTCAACCTTACATACAGTCACAATTGAAAGCACAGAGA
ttttcgaggcagttcatgttgttggttttgaatttttaccttactcgccatgcagGTTTTCTTTCACCGTCAACCTTACATACAGTCACAATTGAAAGCACAGAGAATGATGCCAATTGCTGGGCGACATGCAGCCTATCCCTGCATGCATGCAG
accttac putative branch site (score: 6)
tttttaccttactc CT-rich tract
ttttgaattttta TA-rich tract