Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|88695658|gb|CI737696.1|CI737696EST: GTCGTCTCGTCGGAGATGGCCTCCTCCGCCTCATGGCCGGCGTTCGGAGT AAGCCCAGAGGAAGCAGGGAAGGGTAAATGGTACATCGCAACTGCTGCTAC
genomic: GTCGTCTCGTCGGAGATGGCCTCCTCCGCCTCATGGCCGGCGTTCGGAGTgtaatgtgcc ... ttatctccagAAGCCCAGAGGAAGCAGGGAAGGGTAAATGGTACATCGCAACTGCTGCTAC
EST:
gi|58681823|gb|CK070510.1|CK070510EST: GTCGTCTCGTCGGAGATGGCCTCCTCCGCCTCATGGCCGGCGTTCGGAGT AAGCGCAGAGGAAGCAGGGAAGGGTAAATGGTACATCGCAACTGCTGCTAC
genomic: GTCGTCTCGTCGGAGATGGCCTCCTCCGCCTCATGGCCGGCGTTCGGAGTgtaatgtgcc ... ttatctccagAAGCCCAGAGGAAGCAGGGAAGGGTAAATGGTACATCGCAACTGCTGCTAC
EST:
gi|88719686|gb|CI743196.1|CI743196EST: GTCGTCTCGTCGGAGATGGCCTCCTCCGCCTCATGGCCGGCGTTCGGAGT ---CCCAGAGGAAGCAGGGAAGGGTAAATGGTACATCGCAACTGCTGCTAC
genomic: GTCGTCTCGTCGGAGATGGCCTCCTCCGCCTCATGGCCGGCGTTCGGAGTgtaatgtgcc ... ttatctccagAAGCCCAGAGGAAGCAGGGAAGGGTAAATGGTACATCGCAACTGCTGCTAC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TCTCATCCCTTCCCCGAACTCACGAACGCACGCCGCCACCACCGCCCACCGTCGTCTCGTCGGAGATGGCCTCCTCCGCCTCATGGCCGGCGTTCGGAGTgtaatgtgccttctcctcctcctcctctttctcagctgtacaggagcttgattcgttatcacgtcgtttccttagatcgatatagaccccccaacatttt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC