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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGAGTCACAGGCCGGTGGGTCCTTCACTGTTACACGTGATACCTCTGGTGAGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagattcagcacatttctcttgtgaattcctattacttgtgtgatatatgttgctgtccatgtgatgttttttttgtcagaactttagatgttctg...

Basic information

species Oryza sativa
transcript LOC_Os09g30412.1
intron # 2
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os09g30412.1 (Oryza sativa), 5'ss of exon 2
lower sequence: GRMZM2G112165_T01 (Zea mays), 5'ss of exon 2
GGAGTCACAGGCCGGTGGGTCCTTCACTGTTACACGTGATACCTCTGGTGAGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagattcagcacatttctcttgtgaattcctattacttgtgtgatatatgttgctgtccatgtgatgttttttttgt--cagaactttagatgttctg---
|||||| || || || ||||| ||||||||||| ||||| || || || |||||||||||  |||| ||||||||||| || | ||| ||||| ||||||||||  | | ||      |||  |     ||   |||||  | | |  | |    |||     |||| ||  | || | ||  || ||    ||     |||   
GGAGTCCCAAGCGGGCGGGTCGTTCACTGTTACTCGTGACACGTCAGGGGAGCAGCTTGGCAGGGGCACTAAGATCACACTGTTCCTTAAGGACGATCAGgtat--gctgcaagctgcttcaatcaaagatcgttattatgttttttgt-tgcaatgca--taatgtaatcgtgttctagtggcacaagccaagtgtgcctgtgt

upper sequence: LOC_Os09g30412.1 (Oryza sativa), 5'ss of exon 2
lower sequence: GRMZM2G069651_T02 (Zea mays), 5'ss of exon 2
GGAGTCACAGGCCGGTGGGTCCTTCACTGTTACACGTGATACCTCTGGTGAGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagattcagcacatttctcttgtgaattcctattacttgtgtgatatatgttgctgtcc---atgtgatgttttttttgt-cagaactttagatgttctg----
||| || ||||| || ||||| ||||||||||| ||||| || ||||| |||||||||||  ||||||||||||| || || | ||||||||| ||||||||||      ||| |   |       | ||  |   |||    | || ||| ||||||  | |   |||| || | || |   | || |||   ||     |||    
GGAATCCCAGGCGGGCGGGTCGTTCACTGTTACTCGTGACACGTCTGGGGAGCAGCTTGGCAGGGGTACTAAGATTACACTTTTCCTCAAGGAAGATCAGgtatg-----caggaagctggatcaatcaaagctcgttat---tatggtatctgttgcattgcttgatgtaatctgttctaattgcataacccaagtatgcctgtgtt
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|29624076|gb|CB629087.1|CB629087
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|58669805|gb|CK058491.1|CK058491
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29677095|gb|CB673370.1|CB673370
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29646114|gb|CB651121.1|CB651121
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29662017|gb|CB658292.1|CB658292
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|58663275|gb|CK051961.1|CK051961
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAA
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAA
EST: gi|29623678|gb|CB628689.1|CB628689
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGGGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29677663|gb|CB673938.1|CB673938
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29645288|gb|CB650295.1|CB650295
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29658811|gb|CB655086.1|CB655086
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29638360|gb|CB643369.1|CB643369
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|58670762|gb|CK059448.1|CK059448
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29622381|gb|CB627392.1|CB627392
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|86535615|gb|CI175821.1|CI175821
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29640901|gb|CB645908.1|CB645908
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29623643|gb|CB628654.1|CB628654
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29672043|gb|CB668318.1|CB668318
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|86876831|gb|CI309680.1|CI309680
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|86599894|gb|CI256056.1|CI256056
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAC                         CTGGAATACCTTGAGGAGCGTCGCCTCAAG
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAG
EST: gi|29629956|gb|CB634965.1|CB634965
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29644908|gb|CB649915.1|CB649915
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29621981|gb|CB626992.1|CB626992
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29626388|gb|CB631399.1|CB631399
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29645258|gb|CB650265.1|CB650265
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|58668609|gb|CK057295.1|CK057295
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29658503|gb|CB654778.1|CB654778
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29642190|gb|CB647197.1|CB647197
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|89165120|gb|CI255177.1|CI255177
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTC
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTC
EST: gi|29669800|gb|CB666075.1|CB666075
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29658944|gb|CB655219.1|CB655219
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|86900731|gb|CI302148.1|CI302148
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29646695|gb|CB651702.1|CB651702
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|86257131|gb|CI061894.1|CI061894
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|86601330|gb|CI251704.1|CI251704
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29655913|gb|CB652188.1|CB652188
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29667171|gb|CB663446.1|CB663446
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|25804088|gb|CA760049.1|CA760049
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTTT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|86594722|gb|CI255798.1|CI255798
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAAGATGATCAG                         CTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29674878|gb|CB671153.1|CB671153
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|5003432|gb|AU068581.1|AU068581
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCA
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCA
EST: gi|29669983|gb|CB666258.1|CB666258
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29626532|gb|CB631543.1|CB631543
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29673862|gb|CB670137.1|CB670137
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29646749|gb|CB651756.1|CB651756
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29679642|gb|CB675917.1|CB675917
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29670027|gb|CB666302.1|CB666302
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29674741|gb|CB671016.1|CB671016
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|33690123|gb|CF318362.1|CF318362
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|89165239|gb|CI255296.1|CI255296
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAACGTCGCCTCA
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCA
EST: gi|58670464|gb|CK059150.1|CK059150
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29677898|gb|CB674173.1|CB674173
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29677832|gb|CB674107.1|CB674107
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29629924|gb|CB634933.1|CB634933
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29670201|gb|CB666476.1|CB666476
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29626835|gb|CB631846.1|CB631846
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|58589946|gb|CF988254.1|CF988254
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCGTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|87025915|gb|CI282492.1|CI282492
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|86258451|gb|CI064804.1|CI064804
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29660965|gb|CB657240.1|CB657240
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|58606011|gb|CK034044.1|CK034044
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|58609803|gb|CK037836.1|CK037836
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29678463|gb|CB674738.1|CB674738
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29663721|gb|CB659996.1|CB659996
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAAGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAACGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29665245|gb|CB661520.1|CB661520
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29624294|gb|CB629305.1|CB629305
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29644009|gb|CB649016.1|CB649016
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29640653|gb|CB645662.1|CB645662
EST:     AGCAGCTTGGACGGGGTACTAAGATCGCCCTCTACCTCGAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|87024351|gb|CI255114.1|CI255114
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAC                         CTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29677947|gb|CB674222.1|CB674222
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29665109|gb|CB661384.1|CB661384
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|58607336|gb|CK035369.1|CK035369
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29642011|gb|CB647018.1|CB647018
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29639005|gb|CB644014.1|CB644014
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29624074|gb|CB629085.1|CB629085
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29639175|gb|CB644184.1|CB644184
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29657469|gb|CB653744.1|CB653744
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|58685916|gb|CK074603.1|CK074603
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGA
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGA
EST: gi|29655765|gb|CB652040.1|CB652040
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|58612289|gb|CK040001.1|CK040001
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29639607|gb|CB644616.1|CB644616
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29678543|gb|CB674818.1|CB674818
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29635676|gb|CB640685.1|CB640685
EST:     AGCAGCTTGGACGGGGTACTAATATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAACATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29628561|gb|CB633572.1|CB633572
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|58672293|gb|CK060979.1|CK060979
EST:     CTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: CTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29677545|gb|CB673820.1|CB673820
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29670894|gb|CB667169.1|CB667169
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|58608281|gb|CK036314.1|CK036314
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|86419871|gb|CI054672.1|CI054672
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29622499|gb|CB627510.1|CB627510
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29628326|gb|CB633337.1|CB633337
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29626098|gb|CB631109.1|CB631109
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29645965|gb|CB650972.1|CB650972
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|86424706|gb|CI063467.1|CI063467
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|58692600|gb|CK081287.1|CK081287
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29658129|gb|CB654404.1|CB654404
EST:     AGCAGCTTGGACGGGGTACTAAGATCCCCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGA
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGA
EST: gi|29624365|gb|CB629376.1|CB629376
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|86419690|gb|CI054491.1|CI054491
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29670214|gb|CB666489.1|CB666489
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29660687|gb|CB656962.1|CB656962
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|29657838|gb|CB654113.1|CB654113
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
EST: gi|8324399|gb|AU091554.1|AU091554
EST:     AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAG                         CTGGAATACCTTGAGGAGCGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT
genomic: AGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCT

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 75 (upstream exon), 75 (downstream exon)
Score: 974

GGAGTCACAGGCCGGTGGGTCCTTCACTGTTACACGTGATACCTCTGGTGAGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagatt ... ttacttgcagCTGGAATACCTTGAGGAACGTCGCCTCAAGGATCTGGTGAAGAAGCATTCTGAGTTCATCAGCTACCCTATCTCCTTATGGACTGAGAAGACAACCGAGA




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Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GGAGTCACAGGCCGGTGGGTCCTTCACTGTTACACGTGATACCTCTGGTGAGCAGCTTGGACGGGGTACTAAGATCACCCTCTACCTCAAGGATGATCAGgtataagattcagcacatttctcttgtgaattcctattacttgtgtgatatatgttgctgtccatgtgatgttttttttgtcagaactttagatgttctg

- - - - - - - - - - - - - - - - - - - - - - - - -  GCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGATCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGGATG