1 5' 3' | 2 5' 3' | 3 5' 3' |
CGCCGGGAAGCCGGCGGCGGGGCTCGGCAAGGGCGGCGCCGCCGCCGCCGGCCACGGCAACGCCGCCAAGCGATACCACGACGACGACTTCGCCTCCACGgtgagccactccaccaaccaaccattgcacataggggcctcatttttagttgcttatatttatcagccaaaatttaaattttcaaccttaaatttagctg...
species | Oryza sativa |
transcript | LOC_Os08g41470.2 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GCCACGGCAACGCCGCCAAGCGATACCACGACGACGACTTCGCCTCCACG AAGTGCTCCTGCTTTGGATGGTGCAAATAGAGATGGATTTTGAGGCTGTTAEST: gi|16579089|gb|BI813184.1|BI813184
genomic: GCCACGGCAACGCCGCCAAGCGATACCACGACGACGACTTCGCCTCCACGgtgagccact ... taatttgcagAAGTGCTCCTGCTTTGGATGGTGCAAATAGAGATGGATTTTGAGGCTGTTA
EST: CGACGACGACTTCGCACTCCACG AAGTGCTCCTGCTTTGGATGGTGCAAATAGAGATGGATTTCGAGGCATGT
genomic: CGACGACGACTTCGC-CTCCACGgtgagccact ... taatttgcagAAGTGCTCCTGCTTTGGATGGTGCAAATAGAGATGGATTTTGAGGC-TGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGCCGGGAAGCCGGCGGCGGGGCTCGGCAAGGGCGGCGCCGCCGCCGCCGGCCACGGCAACGCCGCCAAGCGATACCACGACGACGACTTCGCCTCCACGgtgagccactccaccaaccaaccattgcacataggggcctcatttttagttgcttatatttatcagccaaaatttaaattttcaaccttaaatttagctg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctccacc