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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TAAAACAGATCCGATCACTCTCCTGATCGGCGCCGGCGTTAATTCCAAGAAAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagatcactctctcaatccaccagcatcatcgtttctacgcttaataccgctataaagatgaagaaatctttaccatcgtctgctccctcgtttg...

Basic information

species Oryza sativa
transcript LOC_Os08g06550.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|88691313|gb|CI733897.1|CI733897
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88340252|gb|CI652601.1|CI652601
EST:     AAAGAAGAAGAGAAGAATCTG-AAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88372117|gb|CI641752.1|CI641752
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88356736|gb|CI619222.1|CI619222
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|702941|gb|D49232.1|D49232
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTNAGCAGTACGCCGAGAAGG-GAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88347926|gb|CI636019.1|CI636019
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|33672745|gb|CF300984.1|CF300984
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|58672686|gb|CK061372.1|CK061372
EST:     AAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88353733|gb|CI634524.1|CI634524
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|6934908|gb|AU082445.1|AU082445
EST:     GAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGANCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: GAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88453812|gb|CI685927.1|CI685927
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|66922316|gb|CX109164.1|CX109164
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|38475857|gb|CF959990.1|CF959990
EST:     AAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88307851|gb|CI646286.1|CI646286
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88996095|gb|CI037386.1|CI037386
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88585755|gb|CI701495.1|CI701495
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTACCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|58595711|gb|CK006239.1|CK006239
EST:     AAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88406076|gb|CI593856.1|CI593856
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88507888|gb|CI435394.1|CI435394
EST:     AAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|2428894|gb|C73357.1|C73357
EST:     GAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGG-GAAGACCTTGCCGGAGAGCACT
genomic: GAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88572048|gb|CI663619.1|CI663619
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88572142|gb|CI663713.1|CI663713
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTGCGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|163928262|gb|EG712566.1|EG712566
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88959007|gb|CI685773.1|CI685773
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|38478583|gb|CF962716.1|CF962716
EST:     AAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88992607|gb|CI035662.1|CI035662
EST:     CTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: CTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88691682|gb|CI733760.1|CI733760
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88975940|gb|CI024191.1|CI024191
EST:     AAAGAAGAAGAGAAGAATCTGGAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88460131|gb|CI695333.1|CI695333
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTACCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88376849|gb|CI639174.1|CI639174
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88325676|gb|CI648118.1|CI648118
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88424099|gb|CI689801.1|CI689801
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|58663225|gb|CK051911.1|CK051911
EST:     AAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88330685|gb|CI635319.1|CI635319
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88509914|gb|CI437420.1|CI437420
EST:     AAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88305815|gb|CI633388.1|CI633388
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88369128|gb|CI679085.1|CI679085
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|86849226|gb|CI297720.1|CI297720
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88353296|gb|CI654562.1|CI654562
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|163928670|gb|EG711207.1|EG711207
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|38478490|gb|CF962623.1|CF962623
EST:     AAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCAGT
genomic: AAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88665230|gb|CI709925.1|CI709925
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88585897|gb|CI703568.1|CI703568
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88986127|gb|CI033456.1|CI033456
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88575885|gb|CI670030.1|CI670030
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88363350|gb|CI643208.1|CI643208
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88690319|gb|CI734398.1|CI734398
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|33672746|gb|CF300985.1|CF300985
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|27578294|gb|CB000989.1|CB000989
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88308124|gb|CI647951.1|CI647951
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88572279|gb|CI663850.1|CI663850
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88851853|gb|CI679411.1|CI679411
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88665094|gb|CI708836.1|CI708836
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|38478431|gb|CF962564.1|CF962564
EST:     AAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGTGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAGGACCTTGCCTGGAGAGCA
genomic: AAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATG-GGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCC-GGAGAGCA
EST: gi|88341547|gb|CI641299.1|CI641299
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88586865|gb|CI704586.1|CI704586
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88529302|gb|CI457607.1|CI457607
EST:     TTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: TTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|25799076|gb|CA755037.1|CA755037
EST:     GAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: GAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88355272|gb|CI678973.1|CI678973
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88330558|gb|CI635182.1|CI635182
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|38478830|gb|CF962963.1|CF962963
EST:     AAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|14713791|gb|AU197756.1|AU197756
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|29689575|gb|CB685850.1|CB685850
EST:     AAAGAACCATAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCCAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88394006|gb|CI684274.1|CI684274
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88351629|gb|CI628849.1|CI628849
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|87010488|gb|CI283563.1|CI283563
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88690472|gb|CI734551.1|CI734551
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88328350|gb|CI651363.1|CI651363
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88587682|gb|CI704319.1|CI704319
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88329442|gb|CI648499.1|CI648499
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88728971|gb|CI752481.1|CI752481
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88288418|gb|CI661623.1|CI661623
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|117237952|gb|CT861991.1|CT861991
EST:     -AA-AAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88963148|gb|CI026821.1|CI026821
EST:     AAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88724936|gb|CI748195.1|CI748195
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88365512|gb|CI680153.1|CI680153
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|6934864|gb|AU082401.1|AU082401
EST:     AAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|163922919|gb|EG712744.1|EG712744
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACC
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACC
EST: gi|88590624|gb|CI708404.1|CI708404
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88974472|gb|CI022013.1|CI022013
EST:     AAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88326263|gb|CI660082.1|CI660082
EST:     AAAGAAGAAGAGAAGAATCTGAACAACTTTAAGCCGNTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|702979|gb|D49270.1|D49270
EST:     AGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGG-GAAGACCTTGCCGGAGAGCACT
genomic: AGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88490652|gb|CI427924.1|CI427924
EST:     GCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: GCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
EST: gi|88590656|gb|CI707533.1|CI707533
EST:     AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAG                         GAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT
genomic: AAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACT

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 69 (upstream exon), 63 (downstream exon)
Score: 347

TAAAACAGATCCGATCACTCTCCTGATCGGCGCCGGCGTTAATTCCAAGAAAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagat ... ccaattgcagGAGGATTTTGAGCAGTACGCCGAGAAGGCGAAGACCTTGCCGGAGAGCACTAGCAACGAGAACAAGCTTATCCTCTATGGACTCTACAAGCAGGCCACCG




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Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
TAAAACAGATCCGATCACTCTCCTGATCGGCGCCGGCGTTAATTCCAAGAAAAGAAGAAGAGAAGAATCTGAAAAACTTTAAGCCGCTATGGGTCTGCAGgtatgcagatcactctctcaatccaccagcatcatcgtttctacgcttaataccgctataaagatgaagaaatctttaccatcgtctgctccctcgtttg

- - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - -  AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctccctc