Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaaacctcgcagccgccgccgccgccgcggcctcctcatggcttctccatagctctaacgtggtgatcttgttgtggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTCTGCGTCCGCTGCGGCCGCCGCAGCTTCCACCTCCAGAAGAGCACCTGCT

Basic information

species Oryza sativa
transcript LOC_Os08g03450.1
intron # 1
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: LOC_Os08g03450.1 (Oryza sativa), 3'ss of exon 1
lower sequence: GRMZM2G168674_T01 (Zea mays), 3'ss of exon 1
gtaaacctcgcagccgccgccgccgccgcg-gcctcctcatggcttctccatagctc---------------taacgtggtgatct--------tgttgtggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTCTGCGTCCGCTGCGGCCGCCGCAGCTTCCACCTCCAGAAGAGCACCTGCT
|||    |||| |||| |||||  ||| ||   |||| |    | ||||| |   ||               | |||||||| | |        ||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||| |||||||
gtacgtgtcgccgccgtcgccgttgccacgcagctcccctctacgtctccgttcgtccgtgcgtctgtccgctgacgtggtgctatggtgctgttgttgtggctcgcagGGGAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAAACGCACACGCTGTGCATCCGCTGCGGCCGCCGCAGCTTCCACCTCCAGAAGAGTACCTGCT

upper sequence: LOC_Os08g03450.1 (Oryza sativa), 3'ss of exon 1
lower sequence: GRMZM2G077991_T02 (Zea mays), 3'ss of exon 1
gtaaacct-cgcagccgccgccgccgccgcggcctcctcatggcttctccatagctctaacgtggtgatcttgttgtggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTCTGCGTCCGCTGCGGCCGCCGCAGCTTCCACCTCCAGAAGAGCACCTGCT
|||      ||| ||||| |||||| || ||||  || |  | |  | |  | |||  ||| ||  |   ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||
gtacgttcgcgccgccgctgccgcctccccggcagcccc-cgtccgcccgctcgct--aacatgcag---ttgttgtggcttgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTCTGCATCCGCTGCGGCCGCCGCAGCTTCCACCTCCAGAAGAGTACCTGCT

upper sequence: LOC_Os08g03450.1 (Oryza sativa), 3'ss of exon 1
lower sequence: GLYMA07G00700.1 (Glycine max), 3'ss of exon 1
-----gtaaacctcgcagccgccgccgccgccgcggcctcctcatggcttctccatagctctaacg----tggtgatcttgttgtg---gctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTCTGCGTCCGCTGCGGCCGCCGCAGCTTCCACCTCCAGAAGAGCACCTGCT
     ||   | || |   | |     | |    |   |      |  ||    ||     | | |    ||| | |  | |||||   | | |||||||||||| ||||| || ||||| ||| |  |||||||||| ||||| ||||| ||  | || ||||||||||| |||||||||||||||||    ||| 
gtactgtttccttctcttactctaa-acggatttgagattagttcgattttgtgatgatgatgatgctgatggagtttgtattgtgaatgtttgcagGGTAAGGGAACGGGGAGTTTCGGTAAGAGAAGGAACAAGACCCACACCCTCTGTGTGAGGTGTGGCCGCCGCAGTTTCCACCTCCAGAAGAGTCGTTGCG

upper sequence: LOC_Os08g03450.1 (Oryza sativa), 3'ss of exon 1
lower sequence: GLYMA13G43450.1 (Glycine max), 3'ss of exon 1
gtaaacctcgcagccgccgccgccgccgcggcctcctcatggcttc------tccatagctctaacgtggtgatcttgttgtggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTCTGCGTCCGCTGCGGCCGCCGCAGCTTCCACCTCCAGAAGAGCACCTGCT
||||  |       | |   | |   | |   |||   |||   |       | | | | | | ||  |    | ||    |||  ||||||| ||||| || || |||||||| ||| |  |||||||||| ||||| ||||| ||  | || |||||||||||||||||||||||||||||   |||| 
gtaatgccttttctccctatctctttctctttctctatatgttattatacgattcgtcgttttgacacgt--gtgtttaaatggaacgcagGGGAAGGGAACAGGGAGCTTCGGTAAGAGGAGGAACAAGACCCACACTCTCTGTGTGAGGTGTGGCCGCCGCAGCTTCCACCTCCAGAAGAGTCGCTGCG

upper sequence: LOC_Os08g03450.1 (Oryza sativa), 3'ss of exon 1
lower sequence: GLYMA08G21960.1 (Glycine max), 3'ss of exon 1
gtaaacctcgcagccgccgccgccgccgc-ggcctcctcatggcttctccatagctctaacg-tggtgatcttgttgtgg-ctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTCTGCGTCCGCTGCGGCCGCCGCAGCTTCCACCTCCAGAAGAGCACCTGCT
|||    |     |         ||   | |   |      |  ||    ||       | | ||||| |    ||| |   | |||||||||||| ||||| || ||||| ||| |  |||||||||| ||||| ||||| ||  | || |||||||||||||||||||||||||||||    ||||
gtactgtttatttctcttaaaaacggatctgagattagttcgattttgtgatgatgacgatgatggtgtttgaattgcgaatttgcagGGTAAGGGAACGGGGAGTTTCGGTAAGAGGAGGAACAAGACCCACACCCTCTGTGTGAGGTGTGGCCGCCGCAGCTTCCACCTCCAGAAGAGTCGTTGCT

upper sequence: LOC_Os08g03450.1 (Oryza sativa), 3'ss of exon 1
lower sequence: GLYMA15G01860.1 (Glycine max), 3'ss of exon 1
------gtaaacctcgcagccgccgccgccgccgcggcctcctcatg-gcttctccata-gctctaacgtggtgat-cttgtt-----gtggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTCTGCGTCCGCTGCGGCCGCCGCAGCTTCCACCTCCAGAAGAGCACCTGCT
       |    ||| |   | |   | |   | |   ||| |  || |  |    ||| | |   |||   |||  | |||       |||  ||||||| ||||| || || || || || ||| |  |||||||||| ||||| ||||| ||  | || ||||||||||||||||| |||||||||||    ||| 
gtactactttttctccctcactctttctctttccctttctctttctgtgtattattatatgattcgacggtttgacacgtgtgcgtaaatggaacgcagGGGAAGGGAACAGGGAGTTTTGGTAAGAGAAGGAACAAGACTCACACTCTCTGTGTGAGGTGTGGCCGCCGCAGCTTCCATCTCCAGAAGAGTCGTTGCG

upper sequence: LOC_Os08g03450.1 (Oryza sativa), 3'ss of exon 1
lower sequence: Vv04s0008g03900.t01 (Vitis vinifera), 3'ss of exon 1
------gtaaacctcgcagccgccgccgccgccgcggcctcct----------catggcttctccatagctctaacgt-ggtgatcttgttgtggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTCTGCGTCCGCTGCGGCCGCCGCAGCTTCCACCTCCAGAAGAGCACCTGCT
       || | ||  |  |   | |   |  |     |   |           |||  || |       | | |  | | |  |  |||||       ||||||||||| || || |||||||| ||| |  |||||||||| ||||||||||| ||||| || || ||| | ||||| ||||| |||||||||   ||| 
gtacgtctatatctgtctactttctctctcttcagaatcatatgtatgaagaatatgtattgtatgagattttgattttgattttgatgttgaattgaacagGGTAAGGGAACAGGAAGCTTCGGAAAGAGGAGGAACAAGACCCACACGCTCTGTGTCCGATGTGGACGCAGAAGCTTTCACCTTCAGAAGAGCCGATGCG

upper sequence: LOC_Os08g03450.1 (Oryza sativa), 3'ss of exon 1
lower sequence: Vv09s0002g04440.t01 (Vitis vinifera), 3'ss of exon 1
-----------gtaaacctcgcagccgccgccgccgccgcggcctcctca----tggcttctccatagctctaacgtggtgatcttgttgtggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTCTGCGTCCGCTGCGGCCGCCGCAGCTTCCACCTCCAGAAGAGCACCTGCT
            | ||  || |       |       |  |  ||  | |    ||  |   |    |   |||  || |    |   | |      ||||| || || || || |||||||| ||| |  |||||||||| ||||| ||||||||||| ||||| |||||||||||||| || |||||||||   ||| 
tttccttttgtttcaatttctcgctaagggaacagatcctgatctttttagacgtgtgtaggcttgtgtattaatctgattgagtatctatatgcaacagGGAAAAGGAACAGGAAGCTTCGGTAAGAGAAGGAACAAGACTCACACCCTCTGCGTCCGGTGCGGTCGCCGCAGCTTCCATCTGCAGAAGAGCCGATGCG

upper sequence: LOC_Os08g03450.1 (Oryza sativa), 3'ss of exon 1
lower sequence: PP1S475_18V6.1 (Physcomitrella patens), 3'ss of exon 1
-----gtaaacctcgcagccgccgccgccgccgcggcctcctcatggcttctccatagctctaacgtggtgatcttgt----------tgtggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTCTGCGTCCGCTGCGGCCGCCGCAGCTTCCACCTCCAGAAGAGCACCTGCT
      |  | || |  |        |     |     | |  |||| ||  |          ||||||||   || |          | |  || ||||   || ||||| || ||||| || ||||||||||||||| | |||||||| |||   ||||| |||||| | ||||| ||| |||||||||||  |||||
tgcttttggatcttggtgatattatggttagggtttattgcggatgggtttactgagctatggacgtggtgcgtttatatgtatcttctctttcttgcagACGAAAGGTACTGGAAGCTTTGGTAAGCGCCGGAACAAGTCACACACGCTGTGCAGGCGCTGTGGCCGCAGAAGCTTTCACATCCAGAAGAGCCGCTGCT

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|88964355|gb|CI055052.1|CI055052
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|86252925|gb|CI057850.1|CI057850
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88994805|gb|CI036386.1|CI036386
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88308426|gb|CI650835.1|CI650835
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|33672817|gb|CF301056.1|CF301056
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|87028662|gb|CI266061.1|CI266061
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88734056|gb|CI757564.1|CI757564
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|86829099|gb|CI282829.1|CI282829
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGGCGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|87016153|gb|CI281896.1|CI281896
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88242336|gb|CI242185.1|CI242185
EST:     GCAGCCGCCCCATTGTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88316104|gb|CI620382.1|CI620382
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|86532655|gb|CI172861.1|CI172861
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGGGCAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|112785738|gb|EE591309.1|EE591309
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88677020|gb|CI731133.1|CI731133
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|86531855|gb|CI172061.1|CI172061
EST:     GCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88587608|gb|CI705366.1|CI705366
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|87022998|gb|CI280015.1|CI280015
EST:     AGCCTAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: AGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88577081|gb|CI673634.1|CI673634
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|163920986|gb|EG710399.1|EG710399
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCT
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAA-GGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCT
EST: gi|88206782|gb|CI206631.1|CI206631
EST:     GCAGCCGCCCCATTCTCCAGCCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88979040|gb|CI025555.1|CI025555
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|87019470|gb|CI281971.1|CI281971
EST:     CAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: CAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|87007588|gb|CI281052.1|CI281052
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88738917|gb|CI762425.1|CI762425
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88964528|gb|CI055224.1|CI055224
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88972501|gb|CI717241.1|CI717241
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|86533887|gb|CI174093.1|CI174093
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88736148|gb|CI759656.1|CI759656
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|86821871|gb|CI309291.1|CI309291
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|86258062|gb|CI064415.1|CI064415
EST:     AGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: AGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88209399|gb|CI209248.1|CI209248
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88578830|gb|CI687784.1|CI687784
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88904654|gb|CI711953.1|CI711953
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|86415848|gb|CI029859.1|CI029859
EST:     CCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: CCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88244216|gb|CI243338.1|CI243338
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|89172935|gb|CI040828.1|CI040828
EST:     CAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: CAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88762244|gb|CI771800.1|CI771800
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88240230|gb|CI239392.1|CI239392
EST:     GGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88324784|gb|CI657655.1|CI657655
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88673168|gb|CI727282.1|CI727282
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88735027|gb|CI758535.1|CI758535
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88211072|gb|CI212505.1|CI212505
EST:     ATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGGACAAGACGCACACGCTC
genomic: ATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88665774|gb|CI715930.1|CI715930
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88849931|gb|CI001637.1|CI001637
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|86541895|gb|CI182101.1|CI182101
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88762316|gb|CI771872.1|CI771872
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88670954|gb|CI725070.1|CI725070
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88208372|gb|CI208221.1|CI208221
EST:     GATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88668447|gb|CI722009.1|CI722009
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|55440640|gb|CV733631.1|CV733631
EST:     GCAGCCGCCCCATTCTCCAACCCCAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|163926345|gb|EG712891.1|EG712891
EST:     GAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|9884509|gb|BE607342.1|BE607342
EST:     CCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: CCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|86414143|gb|CI068546.1|CI068546
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88588448|gb|CI706266.1|CI706266
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|396941239|gb|HO188448.1|HO188448
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88830687|gb|CI078131.1|CI078131
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|163927977|gb|EG712953.1|EG712953
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88825284|gb|CI775849.1|CI775849
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|58611422|gb|CK039134.1|CK039134
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|86417602|gb|CI031811.1|CI031811
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|86900203|gb|CI300224.1|CI300224
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|86822908|gb|CI251929.1|CI251929
EST:     GCAGCCGCCCCATTTTCCAACCTTAGCCGAGGGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGTTTCGGCAAGCGCCGGAACAAGACGCACACGCTT
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|33811257|gb|CF331518.1|CF331518
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88209615|gb|CI209464.1|CI209464
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88976065|gb|CI024310.1|CI024310
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88213328|gb|CI213177.1|CI213177
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88429280|gb|CI690178.1|CI690178
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88200507|gb|CI200357.1|CI200357
EST:     GATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88670355|gb|CI724471.1|CI724471
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88210023|gb|CI209872.1|CI209872
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|86424151|gb|CI062912.1|CI062912
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88335307|gb|CI650272.1|CI650272
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAGGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88212056|gb|CI211696.1|CI211696
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88392139|gb|CI683972.1|CI683972
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|86596493|gb|CI284804.1|CI284804
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88241016|gb|CI240865.1|CI240865
EST:     GCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|87019042|gb|CI297243.1|CI297243
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88744784|gb|CI768144.1|CI768144
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88665735|gb|CI715891.1|CI715891
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|86849248|gb|CI297736.1|CI297736
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|86824917|gb|CI265104.1|CI265104
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|86828981|gb|CI282741.1|CI282741
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCGCACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88735247|gb|CI758755.1|CI758755
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88404923|gb|CI685357.1|CI685357
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAAAGGAGCAGATCAAGCAAGG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88849866|gb|CI001572.1|CI001572
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88335614|gb|CI642838.1|CI642838
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88673905|gb|CI728018.1|CI728018
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|38469580|gb|CF953711.1|CF953711
EST:     GCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|58687367|gb|CK076054.1|CK076054
EST:     CCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: CCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|8335230|gb|BE040214.1|BE040214
EST:     CCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: CCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88388187|gb|CI627726.1|CI627726
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|58685881|gb|CK074568.1|CK074568
EST:     CCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: CCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88973808|gb|CI718220.1|CI718220
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|87014721|gb|CI269428.1|CI269428
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88355544|gb|CI679264.1|CI679264
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
EST: gi|88825925|gb|CI776490.1|CI776490
EST:     GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATG                         GGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC
genomic: GCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 57 (upstream exon), 70 (downstream exon)
Score: 82

GCACGCCTCCACCGCCGCCGCCGCAGCCGCCCCATTCTCCAACCCTAGCCGAGAGGAGCAGATCAAGCAATGgtaaacctcg ... tggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTCTGCGTCCGCTGCGGCCGCCGCAGCTTCCACCTCCAGAAGAGCACCTGCT




<











<


<











 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gcctcctcatggcttctccatagctctaacgtggtgatcttgttgtggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTCTGCGTCCGCTGCGGCCGCCGCAGCTTCCACCTCCAGAAGAGCACCTGCT
                       ctctaac  putative branch site (score: 82)
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
gtaaacctcgcagccgccgccgccgccgcggcctcctcatggcttctccatagctctaacgtggtgatcttgttgtggctcgcagGGTAAGGGTACGGGCAGCTTCGGCAAGCGCCGGAACAAGACGCACACGCTCTGCGTCCGCTGCGGCCGCCGCAGCTTCCACCTCCAGAAGAGCACCTGCT

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGAGCA