Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|29629418|gb|CB634427.1|CB634427EST: TTCGAGGAGGCCACGGGATACCGCGCGGAGGAGGTGCTCGGCAGGAACTG CCGATTCCTGCAATGCAGAGGACCCTTTGCGCAAAGGAGACATCCCCTAGT
genomic: TTCGAGGAGGCCACGGGATACCGCGCGGAGGAGGTGCTCGGCAGGAACTGgttggttcat ... ccactttcagCCGATTCCTGCAATGCAGAGGACCCTTTGCGCAAAGGAGACATCCCCTAGT
EST:
gi|29664401|gb|CB660676.1|CB660676EST: TGCGAGGAGGCCACGGGATACCGCGCGGAGGAGGTGCTCGGCAGGAACTG CCGATTCCTGCAATGCATAGGACCCTTTGCGCAAAGGAGACGTCCCCTAGT
genomic: TTCGAGGAGGCCACGGGATACCGCGCGGAGGAGGTGCTCGGCAGGAACTGgttggttcat ... ccactttcagCCGATTCCTGCAATGCAGAGGACCCTTTGCGCAAAGGAGACATCCCCTAGT
EST:
gi|29617827|gb|CB622839.1|CB622839EST: TTCGAGGAGGCCACGGGATACCGCGCGGAGGAGGTGCTCGGCAGGAACTG CCGATTCCTGCAATGCAGAGGACCCTTTGCGCAAAGGAGACATCCCCTAGT
genomic: TTCGAGGAGGCCACGGGATACCGCGCGGAGGAGGTGCTCGGCAGGAACTGgttggttcat ... ccactttcagCCGATTCCTGCAATGCAGAGGACCCTTTGCGCAAAGGAGACATCCCCTAGT
EST:
gi|29615716|gb|CB620728.1|CB620728EST: TTCGAGGAGGCCACGGGATACCGCGCGGAGGAGGTGCTCGGCAGGAACTG CCGATTCCTGCAATGCAGAGGACCCTTTGCGCAAAGGAGACATCCCCTAGT
genomic: TTCGAGGAGGCCACGGGATACCGCGCGGAGGAGGTGCTCGGCAGGAACTGgttggttcat ... ccactttcagCCGATTCCTGCAATGCAGAGGACCCTTTGCGCAAAGGAGACATCCCCTAGT
EST:
gi|29664503|gb|CB660778.1|CB660778EST: TTCGAGGAGGCCACGGGATACCGCGCGGAGGAGGTGCTCGGCAGGAACTG CCGATTCCTGCAATGCAGAGGACCCTTTGCGCAAAGGAGACATCCCCTAGT
genomic: TTCGAGGAGGCCACGGGATACCGCGCGGAGGAGGTGCTCGGCAGGAACTGgttggttcat ... ccactttcagCCGATTCCTGCAATGCAGAGGACCCTTTGCGCAAAGGAGACATCCCCTAGT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TCACCGACGCGCTCGAGCCCGACTGCCCCATCATCTACGTCAACTGCGGGTTCGAGGAGGCCACGGGATACCGCGCGGAGGAGGTGCTCGGCAGGAACTGgttggttcatatcaatctcgcatatgtctcagttattggttcgacttgtttgatttgggcgttcgaattggtggcacttaggatcgaatataatttgcat
- - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGGAG