Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|88227997|gb|CI227477.1|CI227477EST: GTTGACTGACCTTGTCAAGGTTGCCCGTGGAAGAAAGAATTAAAATGCAG GTAATAAGCAGAGAAGATTTCAAGTTGCTCCTGGATGCTGGCGATGAGCTG
genomic: GTTGACTGACCTTGTCAAGGTTGCCCGTGGAAGAAAGAATTAAAATGCAGgtacgtgcgt ... tattgtgcagGTAATAAGCAGAGAAGATTTCAAGTTGCTCCTGGATGCTGGCGATGAGCTG
EST:
gi|86493245|gb|CI135878.1|CI135878EST: GTTGACTGACCTTGTCAAGGTTGCCCGTGGAAGAAAGAATTAAAATGCAG GTAATAAGCAGAGAAGATTTCAAGTTGCTCCTGGATGCTGGCGATGAGCTG
genomic: GTTGACTGACCTTGTCAAGGTTGCCCGTGGAAGAAAGAATTAAAATGCAGgtacgtgcgt ... tattgtgcagGTAATAAGCAGAGAAGATTTCAAGTTGCTCCTGGATGCTGGCGATGAGCTG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GTGTTGGCCACTGATGGGTTCAAACATCTGGAGGCGAGCTGTCCCTCGGTGTTGACTGACCTTGTCAAGGTTGCCCGTGGAAGAAAGAATTAAAATGCAGgtacgtgcgtatcagagatgtcatagctgaactgttctattgtgaaattttctctaggatttggcaatgcatcatctctgtttgtgctagaagttttgat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA