1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
gtaagttcaacatatactaacacaatttttgagtgatactatgtttgaaacttcaatttttctgacatgtacattggctgcttttgtagGTTTTTATGTGGATGGGTGGGAGCATACCCAAATTCATGGATTTCTGGAACTAGCAACTGCTTTGTTTTCTCTCTCATGTTTGCAATAGCTGTAGTTGTG
species | Oryza sativa |
transcript | LOC_Os06g45500.1 |
intron # | 5 |
splice site | 3' |
intron type | U2 |
EST: ATTTTTGTTCCAATTGTCATCACCTTGTCCATGATTACATTCCTTGTATG GTTTTTATGTGGATGGGTGGGAGCATACCCAAATTCATGGATTTCTGGAAC
genomic: ATTTTTGTTCCAATTGTCATCACCTTGTCCATGATTACATTCCTTGTATGgtaagttcaa ... gcttttgtagGTTTTTATGTGGATGGGTGGGAGCATACCCAAATTCATGGATTTCTGGAAC
gatactatgtttgaaacttcaatttttctgacatgtacattggctgcttttgtagGTTTTTATGTGGATGGGTGGGAGCATACCCAAATTCATGGATTTCTGGAACTAGCAACTGCTTTGTTTTCTCTCTCATGTTTGCAATAGCTGTAGTTGTG
ttctgac putative branch site (score: 7)
ctgctttt putative PPT
aaacttcaattttt TA-rich tract