Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|66914874|gb|CX101722.1|CX101722EST: CATCCTCTCCTTCACCTTCAGGGAGGCCGTGGAGGACGTGGAATACCAAG GGTACCTGATCCCCAAGGGCTGGAAAGTGCTACCTCTGTTCCGCAACATCC
genomic: CATCCTCTCCTTCACCTTCAGGGAGGCCGTGGAGGACGTGGAATACCAAGgtgagcagca ... ctctgtgcagGGTACCTGATCCCCAAGGGCTGGAAAGTGCTACCTCTGTTCCGCAACATCC
EST:
gi|58599154|gb|CK009682.1|CK009682EST: CATCCTCTCCTTCACCTTCAGGGAGGCCGTGGAGGACGTGGAATACCAAG GGTACCTGATCCCCAAGGGCTGGAAAGTGCTACC
genomic: CATCCTCTCCTTCACCTTCAGGGAGGCCGTGGAGGACGTGGAATACCAAGgtgagcagca ... ctctgtgcagGGTACCTGATCCCCAAGGGCTGGAAAGTGCTACC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CGGATGAAGATGACGAGCCGGGTCATCCAGGAGACGATGAGGGTGGCGTCCATCCTCTCCTTCACCTTCAGGGAGGCCGTGGAGGACGTGGAATACCAAGgtgagcagcagagcagagctgtccggtggcagcctgtccgtccctttcgagacagcctcgcgcttctcttccgctgcgagtgaactggaccgaatggggcagactggttccttaactgaaatagactaactcgatcagtcgtcccagaatctaacctcgttcgatcgtctgctctgtgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGGA