1 5' 3' | 2 5' 3' | 3 5' 3' |
gtttgtacaatgataatgtactataaaactttgttaataagactagcaattatgatcttcacggtaaaaagaatatgtttttatgttttatgcatctaatgtaaacattataatttttagGAAGAGGTTCTATGGGTCTAACCTTCCCTGGATGCCCCGCAACTTACCAGCAGCAATCCCAACAGTTTTTGTTTCAAGGCGAAAGTCAGAGCCAAAAGTT
species | Oryza sativa |
transcript | LOC_Os02g15070.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: TCTAATACCTCGATACGCCAATACTCCTGGCATGGTCTACATCATCCAAG GAAGAGGTTCTATGGGTCTA
genomic: TCTAATACCTCGATACGCCAATACTCCTGGCATGGTCTACATCATCCAAGgtttgtacaa ... taatttttagGAAGAGGTTCTATGGGTCTA
aaaaagaatatgtttttatgttttatgcatctaatgtaaacattataatttttagGAAGAGGTTCTATGGGTCTAACCTTCCCTGGATGCCCCGCAACTTACCAGCAGCAATCCCAACAGTTTTTGTTTCAAGGCGAAAGTCAGAGCCAAAAGTT
atctaat putative branch site (score: 18)
ttttt putative PPT
ttttatgcatctaatg TA-rich tract