Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|86821340|gb|CI266804.1|CI266804EST: CGATAATCAGGCTGCTATATTGGATTTATTTACGTTGGAGCAAG GAGTCAAACTTACGCCGAGCAGGGCGATTGTAATATTTACCGAGGCGCAGG
genomic: CGATAATCAGGCTGCTATATTGGATTTATTTACGTTGGAGCAAGgcaagttatt ... tctcgcgcagGAGGCAAACTTACGCCGAGCAGGGCGATTGTAATATTTACCGAGGCGCAGG
EST:
gi|86855522|gb|CI267051.1|CI267051EST: AAGAATCGATAATCAGGCTGCTATATTGGATTTATTTACGTTGGAGCAAG GAGGCAAACTTACGCCGAGCAGGGCGATTGTAATATTTACCGAGGCGCAGG
genomic: AAGAATCGATAATCAGGCTGCTATATTGGATTTATTTACGTTGGAGCAAGgcaagttatt ... tctcgcgcagGAGGCAAACTTACGCCGAGCAGGGCGATTGTAATATTTACCGAGGCGCAGG
EST:
gi|87025360|gb|CI267726.1|CI267726EST: AAGAATCGATAATCAGGCTGCTATATTGGATTTATTTACGTTGGAGCAAG GAGGCAAACTTACGCCGAGCAGGGCGATTGTAATATTTACCGAGGCGCAGG
genomic: AAGAATCGATAATCAGGCTGCTATATTGGATTTATTTACGTTGGAGCAAGgcaagttatt ... tctcgcgcagGAGGCAAACTTACGCCGAGCAGGGCGATTGTAATATTTACCGAGGCGCAGG
EST:
gi|87025184|gb|CI265749.1|CI265749EST: AAGAATCGATAATCAGGCTGCTATATTGGATTTATTTACGTTGGAGCAAG GAGGCAAACTTACGCCGAGCAGGGCGATTGTAATATTTACCGAGGCGCAGG
genomic: AAGAATCGATAATCAGGCTGCTATATTGGATTTATTTACGTTGGAGCAAGgcaagttatt ... tctcgcgcagGAGGCAAACTTACGCCGAGCAGGGCGATTGTAATATTTACCGAGGCGCAGG
EST:
gi|86855686|gb|CI269013.1|CI269013EST: AAGAATCGATAATCAGGCTGCTATATTGGATTTATTTACGTTGGAGCAAG GAGGCAAACTTACGCCGAGCAGGGCGATTGTAATATTTACCGAGGCGCAGG
genomic: AAGAATCGATAATCAGGCTGCTATATTGGATTTATTTACGTTGGAGCAAGgcaagttatt ... tctcgcgcagGAGGCAAACTTACGCCGAGCAGGGCGATTGTAATATTTACCGAGGCGCAGG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TTCCTTCAAGTAGAGTCTATTATCTTTTGGATGGCAACCTATGGTATTTCAAGAATCGATAATCAGGCTGCTATATTGGATTTATTTACGTTGGAGCAAGgcaagttattatccctctcctttgagcataattgtcccatattccatgcctctattattctatgcattagtcatacatgatttcaaatgcataacctgaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG