1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' |
gttggtttaagcttgtcaatctgtttcggtttatttggtaactatcctgtttttttaactcaaaagttcattattcttttccttcttcatattgtagGATTCAGGAATAAATTTGTCGATGACATAGAGGTTGTGAAAGACAAAAAGGACTGGGGTCTTTTCATTGATTCATGTTTCACTCACTGTCAAACGCCATT
species | Oryza sativa |
transcript | LOC_Os01g66850.1 |
intron # | 10 |
splice site | 3' |
intron type | U2 |
EST: CAAAACTGACATTCGAAATTGTAGTTCCACACAAATCCAAGTATTCAATG GATTCAGGAATAAATTTGTCGATGACATAGAGGTTGTGAAAGACAAAAAGGEST: gi|27554537|gb|CA998437.1|CA998437
genomic: CAAAACTGACATTCGAAATTGTAGTTCCACACAAATCCAAGTATTCAATGgttggtttaa ... catattgtagGATTCAGGAATAAATTTGTCGATGACATAGAGGTTGTGAAAGACAAAAAGG
EST: CAAAACTGACATTCGAAATTGTAGTTCCACACAAATCCAAGTATTCAATG GATTCAGGAATAAATTTGTCGATGACATAGAGGTTGTGAAAGACAAAAAGG
genomic: CAAAACTGACATTCGAAATTGTAGTTCCACACAAATCCAAGTATTCAATGgttggtttaa ... catattgtagGATTCAGGAATAAATTTGTCGATGACATAGAGGTTGTGAAAGACAAAAAGG
tatcctgtttttttaactcaaaagttcattattcttttccttcttcatattgtagGATTCAGGAATAAATTTGTCGATGACATAGAGGTTGTGAAAGACAAAAAGGACTGGGGTCTTTTCATTGATTCATGTTTCACTCACTGTCAAACGCCATT
ttttaac putative branch site (score: 12)
ttcattattcttttcc putative PPT
tttttttaactcaaaa TA-rich tract