1 5' 3' | 2 5' 3' | 3 5' 3' |
GAGGAGCAACATCAGAAACGACTTAAAGAGgtaagctttgtaagatggtgttgcctttaattatctagtgctttagagcatttgtgttaagtgccatatcccaaaaaaaacttcacccacaacgcatgcc...
species | Oryza sativa |
transcript | LOC_Os01g64730.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GAGGAGCAACATCAGAAACGACTTAAAGAG CTCAAGGAAATGGTTGTTCCAGTCATCATTAGGAAAACGTCAGCACGAGATEST: gi|33364654|gb|BP432990.1|BP432990
genomic: GAGGAGCAACATCAGAAACGACTTAAAGAGgtaagctttg ... ctttatgcagCTCAAGGAAATGGTTGTTCCAGTCATCATTAGGAAAACGTCAGCACGAGAT
EST: GAGGAGCAACATCAGAAACGACTTAAAGAG CTCAAGGAAATGGTTGTTCCAGTCATCATTAGGAAAACGTCAGCACGAGAT
genomic: GAGGAGCAACATCAGAAACGACTTAAAGAGgtaagctttg ... ctttatgcagCTCAAGGAAATGGTTGTTCCAGTCATCATTAGGAAAACGTCAGCACGAGAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGGAGCAACATCAGAAACGACTTAAAGAGgtaagctttgtaagatggtgttgcctttaattatctagtgctttagagcatttgtgttaagtgccatatcccaaaaaaaacttcacccacaacgcatgcc
- GGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aaaaaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -cacccac