Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|58611961|gb|CK039673.1|CK039673EST: CGGCGGTCGGGACCGGCGAAGAAGCGGCTTTTCGCTGCGGAGGGAGTGCG CAGGGAAGAAAATCACCTCCACTAATTTTATAGAAGACGTTGAATATATAG
genomic: CGGCGGTCGGGACCGGCGAAGAAGCGGCTTTTCGCTGCGGAGGGAGTGCGgtgagtcgtc ... acatgtgaagCAGGGAAGAAAATCACCTCCACTGATTTTATAGAAGACGTTGAATATATAG
EST:
gi|29623350|gb|CB628361.1|CB628361EST: CGGCGGTCGGGACCGGCGAAGAAGCGGCTTTTCGCTGCGGAGGGAGTGCG CAGGGAAGAAAATCACCTCCACTAATTTTATAGAAGACGTTGAATATATAG
genomic: CGGCGGTCGGGACCGGCGAAGAAGCGGCTTTTCGCTGCGGAGGGAGTGCGgtgagtcgtc ... acatgtgaagCAGGGAAGAAAATCACCTCCACTGATTTTATAGAAGACGTTGAATATATAG
EST:
gi|88449219|gb|CI565865.1|CI565865EST: CGGCGGTCGGGACCGGCGAAGAAGCGGCTTTTCGCTGCGGAGGGAGT--G C-GGGAAGAAAATCACCTCCACTGATTTTATAGAAGACGTTGAATATATAG
genomic: CGGCGGTCGGGACCGGCGAAGAAGCGGCTTTTCGCTGCGGAGGGAGTGCGgtgagtcgtc ... acatgtgaagCAGGGAAGAAAATCACCTCCACTGATTTTATAGAAGACGTTGAATATATAG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GCGGTTTGATCGGATCCCCAATCCTGGGTTCCGGTGGCTCTCGAGCACAGCGGCGGTCGGGACCGGCGAAGAAGCGGCTTTTCGCTGCGGAGGGAGTGCGgtgagtcgtcttctcctccctttactgctcttgcttagtagtataggggggcttcagggcttaacaccttttttggtatgtgtatttctgtgtttgttaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC