Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|88206211|gb|CI206060.1|CI206060EST: GGCTCCTCGTCAGCTCCATCCTACCTCTTCTTCTGCCTTTTTGGAAGGAG CTTGTAGTGAAGCTTTGTTGAGCTTACGCAAAGCAGAGAAGGGCATCGGCG
genomic: GGCTCCTCGTCAGCTCCATCCTACCTCTTCTTCTGCCTTTTTGGAAGGAGgtgaggagag ... gtgaatgcagCTTGTAGTGAAGCTTTGTTGAGCTTACGCAAAGCAGAGAAGGGCATCGGCG
EST:
gi|41882147|gb|BX927771.1|BX927771EST: GGCTCCTCATCAGTTCCATCCTACCTCTTCTTCTGCCTTTTTGGAAGGAG CTTGTAGTGAAGCTTTGTTGAGCTTACGCAAAGCAGAGAAGGGCATTGGCG
genomic: GGCTCCTCGTCAGCTCCATCCTACCTCTTCTTCTGCCTTTTTGGAAGGAGgtgaggagag ... gtgaatgcagCTTGTAGTGAAGCTTTGTTGAGCTTACGCAAAGCAGAGAAGGGCATCGGCG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
ACAGCGGCGGTCTCCAGTACGGCGGGTGCTGCTGGATCTGCCGCATGGAGGGCTCCTCGTCAGCTCCATCCTACCTCTTCTTCTGCCTTTTTGGAAGGAGgtgaggagaggaaagtttcctctggaatttcatactgcatgttatatctttgccaagttggtggtcttagtgtgatactgtgattaatttggaccgatgaagatatgtgtattgaatttttctttgcaagtttaaatcagtgtaacactatgaatgtgagcgtgtgaatgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - TCAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG