1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
...atgtttaactaccatataaagcatcaattttgatacttaaaggcccttttcaacaatactacatatttacatgctaattctaaccatgtttatttcacagATTGCAACGACATGATGAATCAATCTCTCTTCTTAGTCGGAGAAATTGGTGGCAATGATTACAACCATCCTCTTATGGGCGGGGTATCCATTAGAAAGAT
species | Oryza sativa |
transcript | LOC_Os01g46169.2 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: GGGAGCCACGGATCCGGGTGAAGGCCAAGACCCGCAAGACCTTGAGCAAG ATTGCAACGACATGATGAATCAATCTCTCTTCTTAGTCGGAGAAATTGGTGEST: gi|117222356|gb|CT845816.1|CT845816
genomic: GGGAGCCACGGATCCGGGTGAAGGCCAAGACCCGCAAGACCTTGAGCAAGgcaagtcatc ... tatttcacagATTGCAACGACATGATGAATCAATCTCTCTTCTTAGTCGGAGAAATTGGTG
EST: GGGAGCCACGGATCCGGGTGAAGGCCAAGACCCGCAAGACCTTGAGCAAG ATTGCAACGACATGATGAATCAATCTCTCTTCTTAGTCGGAGAAATTGGTG
genomic: GGGAGCCACGGATCCGGGTGAAGGCCAAGACCCGCAAGACCTTGAGCAAGgcaagtcatc ... tatttcacagATTGCAACGACATGATGAATCAATCTCTCTTCTTAGTCGGAGAAATTGGTG
cttttcaacaatactacatatttacatgctaattctaaccatgtttatttcacagATTGCAACGACATGATGAATCAATCTCTCTTCTTAGTCGGAGAAATTGGTGGCAATGATTACAACCATCCTCTTATGGGCGGGGTATCCATTAGAAAGAT
ttctaac putative branch site (score: 6)
tttatttc putative PPT
aatactacatattta TA-rich tract