Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaacgtccattaattcttctgtcacatacagATAATCTGGTTCTTTAATTTGTCTTTGCTTACCGTGATGAGCTCTGAATTTGCAGCCAATGGCGGGATCCATGGCAGCCTCACCGGCATCAGCATCGGCG

Basic information

species Oryza sativa
transcript LOC_Os01g43040.1
intron # 1
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gtaacgtccattaattcttctgtcacatacagATAATCTGGTTCTTTAATTTGTCTTTGCTTACCGTGATGAGCTCTGAATTTGCAGCCAATGGCGGGATCCATGGCAGCCTCACCGGCATCAGCATCGGCG
                               cattaat  putative branch site (score: 3)
                                     ttcttctgtc  CT-rich tract
                                attaattctt  TA-rich tract