Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|8860125|gb|AU097443.1|AU097443EST: CGAGGCTCACGGCGGCTGATATAATGTCTCATATCCAG CATGAGTTGGATTATGGGAGNTAATGATCCACATGTTTCCCCCAGAGTACA
genomic: CGAGGCTCACGGCGGCTGATATAATGTCTCATATCCAGgttcaacctt ... tctttgacagCATGAGTTGGATTAT-GGAGGTAATGATCCACATGTTTCCCCCAGAGTACA
EST:
gi|8858461|gb|AU095779.1|AU095779EST: GGCTCACGGCGNCTGATATAATGTCTCATATCCAG CATGGAGTTGGATTATGGAGGTAATGATCCCACATGTTTCCCCCAGAGTAC
genomic: GGCTCACGGCGGCTGATATAATGTCTCATATCCAGgttcaacctt ... tctttgacagCAT-GAGTTGGATTATGGAGGTAATGAT-CCACATGTTTCCCCCAGAGTAC
EST:
gi|8858452|gb|AU095770.1|AU095770EST: GCTCACGGCGGCTGATATAATGTCTCATATCCAG CATGAGTTGGATTATGGAGGTAATGATCCACATGTTTCCCCCAGAGTACAT
genomic: GCTCACGGCGGCTGATATAATGTCTCATATCCAGgttcaacctt ... tctttgacagCATGAGTTGGATTATGGAGGTAATGATCCACATGTTTCCCCCAGAGTACAT
EST:
gi|218492762|gb|FG946015.1|FG946015EST: CTGATATAATGTCTCATATCCAG CATGAGTTGGATTATGGAGGTAATGATCCACATGTTTCCCCCAGAGTACAT
genomic: CTGATATAATGTCTCATATCCAGgttcaacctt ... tctttgacagCATGAGTTGGATTATGGAGGTAATGATCCACATGTTTCCCCCAGAGTACAT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GAAAAACTCCACCAGTGGATATTGAGAAAGCATGAGGAAGAGTCGAGGCTCACGGCGGCTGATATAATGTCTCATATCCAGgttcaaccttgaatttccttaccttatggttctgccttgttttctattaataacttgagtatgaactagcttagaaatgcagattgtatcatccatctca
- - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT