Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|33801246|gb|CF326496.1|CF326496EST: TCTTCAAGCACGCCAACTTCTCCTCCTTCGTTCGCCAGCTCAACACCTAC GGGTTCCGAAAGGTCACTCCAGATCGGTGGGAGTTTGCAAATGAAGCCTTC
genomic: TCTTCAAGCACGCCAACTTCTCCTCCTTCGTTCGCCAGCTCAACACCTACgtacgtatcc ... tgctatgcagGGGTTCCGAAAGGTCACTCCAGATCGGTGGGAGTTTGCAAATGAAGCCTTC
EST:
gi|218501036|gb|FG961274.1|FG961274EST: CTTCAAGCACGCCAACTTCTCCTCCTTCGATTCGCCAGCTCAACACCTAC GGGTTCCGAAAGGTCACTCCAGATCGGTGGGAGTTTGCAAATGAAGCCTTC
genomic: CTTCAAGCACGCCAACTTCTCCTCCTTCG-TTCGCCAGCTCAACACCTACgtacgtatcc ... tgctatgcagGGGTTCCGAAAGGTCACTCCAGATCGGTGGGAGTTTGCAAATGAAGCCTTC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CTTCGTGGTGTGGGACCCGCACGCGCTCGCCGCCGGCGTGCTCCCGCGCTTCTTCAAGCACGCCAACTTCTCCTCCTTCGTTCGCCAGCTCAACACCTACgtacgtatcccaatcgcccgatctgctgcttgtggtgtgggtggtgttctttctgtgaaccgctgatcggtctcgtgtgcttctgtttcccgtgtaaatt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTCCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTCA