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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgcgtctagtctccggtgactatccggatttccaacgtctggtggacaagagcatccgcttggaagccaagcacaaggaactggagtcgcacaagcgccgcttggcgaatttccgcaatcaatagGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCGCAGCAGCAACAACAGCAGCAGCAGCCTCGCTCCGCGCCTCGACCTC

Basic information

species Oryza sativa
transcript LOC_Os01g35450.1
intron # 2
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gcacaaggaactggagtcgcacaagcgccgcttggcgaatttccgcaatcaatagGGTGCTAACCAAAGGGTCCGCTACACCAATCCCTATCCAGGGGGATCCTCCTCGCAGCAGCAACAACAGCAGCAGCAGCCTCGCTCCGCGCCTCGACCTC
                                       tttccgc  CT-rich tract
                                              aatcaata  TA-rich tract