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microRNA genes
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1
5'
3'
2
5'
3'
3
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4
5'
3'
5
5'
3'
6
5'
3'
Data associated with selected splice site
General
Orthologs
Sequence
atgc
intronic sequence
ATGC
exonic sequence
TGCAGCACATGATGTACGGATTTGGGGATGATCCAAAT
gtaagcccgacctcgatctatgcctttcatctcttaattttcag
Basic information
species
Oryza sativa
transcript
LOC_Os01g23630.1
intron #
3
splice site
5'
intron type
U2
Orthologous splice sites
atgc
intronic sequence
ATGC
exonic sequence
upper sequence:
LOC_Os01g23630.1
(
Oryza sativa
), 5'ss of exon 3
lower sequence:
GRMZM2G081012_T01
(
Zea mays
), 5'ss of exon 2
TGCAGCACATGATGTACGGATTTGGGGATGATCCAAAT
gtaagcccgacctcgatctatgcctttcatctcttaattttcag--------------------------------------------------------
|||| ||||||||||| || |||||||||||||||||||| || | || || || ||||||||
TGCAACACATGATGTATGGCTTTGGGGATGATCCAAAT
gtgagtttactgaacaacttcctgttaaattccttaatttattcttttaaatatatgctgcgagcaataagccattctatgtagttcagagcagtaattt