Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|33794571|gb|CF323172.1|CF323172EST: TCAGGAAGGTGCTTGGGAAGCATGCAAAGTCAATAATGCTGATGTCAAAG GTTGAGAATCAAGAGGGAGTGGCTAACTTTGATGATATCCTGGCACAATCT
genomic: TCAGGAAGGTGCTTGGGAAGCATGCAAAGTCAATAATGCTGATGTCAAAGgtataacatt ... gaattttcagGTTGAGAATCAAGAGGGAGTGGCTAACTTTGATGATATCCTGGCACAATCT
EST:
gi|218479177|gb|FG963866.1|FG963866EST: TCAGGAAGGTGCTTGGGAAGCATGCAAAGTCAATAATGCTGATGTCAAAG GTTGAGAATCAAGAG
genomic: TCAGGAAGGTGCTTGGGAAGCATGCAAAGTCAATAATGCTGATGTCAAAGgtataacatt ... gaattttcagGTTGAGAATCAAGAG
EST:
gi|33804365|gb|CF328057.1|CF328057EST: TCACGAAGGTGCTTGGGAAGCATGCAAAGTCAATAATGCTGATGTCAAAG GTTGAGAATCAAGAGGGAGTGGCTAACTTTGATGATATCCTGGCACAATCT
genomic: TCAGGAAGGTGCTTGGGAAGCATGCAAAGTCAATAATGCTGATGTCAAAGgtataacatt ... gaattttcagGTTGAGAATCAAGAGGGAGTGGCTAACTTTGATGATATCCTGGCACAATCT
EST:
gi|33678537|gb|CF306776.1|CF306776EST: TCAGGAAGGTGCTTGGGAAGCATGCAAAGTCAATAATGCTGATGTCAAAG GTTGAGAATCAAGAGGGAGTGGCTAACTTTGATGATATCCTGGCACAATCT
genomic: TCAGGAAGGTGCTTGGGAAGCATGCAAAGTCAATAATGCTGATGTCAAAGgtataacatt ... gaattttcagGTTGAGAATCAAGAGGGAGTGGCTAACTTTGATGATATCCTGGCACAATCT
EST:
gi|88404025|gb|CI601435.1|CI601435EST: TCAGGAAGGTGCTTGGGAAGCATGCAAAGTCAATAATGCTGATGTCAAAG GTTGAGAATCAAGAGGGAGTGGCTAACTTTGATGATATCCTGGCACAATCT
genomic: TCAGGAAGGTGCTTGGGAAGCATGCAAAGTCAATAATGCTGATGTCAAAGgtataacatt ... gaattttcagGTTGAGAATCAAGAGGGAGTGGCTAACTTTGATGATATCCTGGCACAATCT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
TGACATGATTGCTCTGTCTTTTGTTCGTAAAGGCTCAGACCTTGTAGAGGTCAGGAAGGTGCTTGGGAAGCATGCAAAGTCAATAATGCTGATGTCAAAGgtataacattctcttttgagtattgcacttctaagctgcactttgcaaagattttaatctattgaattttcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ATGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT