1 5' 3' | 2 5' 3' | 3 5' 3' |
CACCATTCGACTTGCTGAGGGACAGgtacctaaatttagcttctcctgcttctcttttatgcctattgctatttattctcttttacgcctatccttattcttttcctgacgattgatatgcaaat...
species | Oryza sativa |
transcript | LOC_Os01g14140.2 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: CACCATTCGACTTGCTGAGGGACAG AAAACTTGGTGCGTGGCGAAGCCGTCAGCAGATGACAAGGTTCTTACGGCGEST: gi|88412635|gb|CI690381.1|CI690381
genomic: CACCATTCGACTTGCTGAGGGACAGgtacctaaat ... accaacacagAAAACTTGGTGCGTGGCGAAGCCGTCAGCAGATGACAAGGTTCTTACGGCG
EST: CACCATTCGACTTGCTGAGGGACAG AAAACTTGGTGCGTGGCGAAGCCGTCAGCAGATGACAAGGTTCTTACGGCGEST: gi|163927940|gb|EG713516.1|EG713516
genomic: CACCATTCGACTTGCTGAGGGACAGgtacctaaat ... accaacacagAAAACTTGGTGCGTGGCGAAGCCGTCAGCAGATGACAAGGTTCTTACGGCG
EST: CACCATTCGACTTGCTGAGGGACAG AAAACTTGGTGCGTGGCGAAGCCGTCAGCAGATGACAAGGTTCTTACGGCGEST: gi|86260931|gb|CI066606.1|CI066606
genomic: CACCATTCGACTTGCTGAGGGACAGgtacctaaat ... accaacacagAAAACTTGGTGCGTGGCGAAGCCGTCAGCAGATGACAAGGTTCTTACGGCG
EST: CACCATTCGACTTGCTGAGGGACAG AAAACTTGGTGCGTGGCGAAGCCGTCAGCAGATGACAAGGTTCTTACGGCGEST: gi|66913626|gb|CX100474.1|CX100474
genomic: CACCATTCGACTTGCTGAGGGACAGgtacctaaat ... accaacacagAAAACTTGGTGCGTGGCGAAGCCGTCAGCAGATGACAAGGTTCTTACGGCG
EST: CACCATTCGACTTGCTGAGGGACAG AAAACTTGGTGCGTGGCGAAGCCGTCAGCAGATGACAAGGTTCTTACGGCGEST: gi|88741066|gb|CI764574.1|CI764574
genomic: CACCATTCGACTTGCTGAGGGACAGgtacctaaat ... accaacacagAAAACTTGGTGCGTGGCGAAGCCGTCAGCAGATGACAAGGTTCTTACGGCG
EST: CACCATTCGACTTGCTGAGGGACAG AAAACTTGGTGCGTGGCGAAGCCGTCAGCAGATGACAAGGTTCTTACGGCGEST: gi|88851563|gb|CI671003.1|CI671003
genomic: CACCATTCGACTTGCTGAGGGACAGgtacctaaat ... accaacacagAAAACTTGGTGCGTGGCGAAGCCGTCAGCAGATGACAAGGTTCTTACGGCG
EST: CACCATTCGACTTGCTGAGGGACAG AAAACTTGGTGCGTGGCGAAGCCGTCAGCAGATGACAAGGTTCTTACGGCG
genomic: CACCATTCGACTTGCTGAGGGACAGgtacctaaat ... accaacacagAAAACTTGGTGCGTGGCGAAGCCGTCAGCAGATGACAAGGTTCTTACGGCG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CACCATTCGACTTGCTGAGGGACAGgtacctaaatttagcttctcctgcttctcttttatgcctattgctatttattctcttttacgcctatccttattcttttcctgacgattgatatgcaaat
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