1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
gtatatatttctccctttaaacatgtttgcaccaattattttagctatggataccaatatgactgatcaacatgttgatccgtccctcttgatggtatatgcctttatcttgaattatctcacactttattagcatcataatacaagttccagcaataacaccgatcaactgttcgccaacaatagGGGGAAACGCGAAGACGCTAATGTTTGCCCACATAAGTCCGGAGGCAGATTCATATGTAGAAACTCTTAGCACATTGAAATTTGCTCAAAGGGCTTCTTG
species | Oryza sativa |
transcript | LOC_Os01g14090.1 |
intron # | 2 |
splice site | 3' |
intron type | U2 |
EST: CATTCCCTACAGAAATAGCAAACTCACCCAATTGCTGCAGAGTTCATTAG GGGGAAACGCGAAGACGCTAATGTTTGCCCACATAAGTCCGGAGGCAGATT
genomic: CATTCCCTACAGAAATAGCAAACTCACCCAATTGCTGCAGAGTTCATTAGgtatatattt ... ccaacaatagGGGGAAACGCGAAGACGCTAATGTTTGCCCACATAAGTCCGGAGGCAGATT
agcatcataatacaagttccagcaataacaccgatcaactgttcgccaacaatagGGGGAAACGCGAAGACGCTAATGTTTGCCCACATAAGTCCGGAGGCAGATTCATATGTAGAAACTCTTAGCACATTGAAATTTGCTCAAAGGGCTTCTTG
caataac putative branch site (score: 4)
ataatacaa TA-rich tract