1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' |
gtattgactagcaaactctggaagctatatcattgtttttctttgtcctcacttctttttgttttcgctatactaagtatttttatctgcagCTCACTTGGCAAACCCCGACGTTTTTCTGATCATTTTCTGGCAGCAGAAAAAGATAAACTTGAAAATTATCGCAAAAAAGTTAGGCAATACTATGCTCTA
species | Oryza sativa |
transcript | LOC_Os01g09760.1 |
intron # | 11 |
splice site | 3' |
intron type | U2 |
EST: TCACTCGGTCCGAGTGGAGCACAATAAGGAG CTCACTTGGCAAACCCCGAGGGGTTTCTGATCATTTTCTGGCGGCAGAAAA
genomic: TCACTCGGTCCGAGTGGAGCACAATAAGGAGgtattgacta ... ttatctgcagCTCACTTGGCAAACCCCGACGTTTTTCTGATCATTTTCTGGCAGCAGAAAA
tttctttgtcctcacttctttttgttttcgctatactaagtatttttatctgcagCTCACTTGGCAAACCCCGACGTTTTTCTGATCATTTTCTGGCAGCAGAAAAAGATAAACTTGAAAATTATCGCAAAAAAGTTAGGCAATACTATGCTCTA
tcctcac putative branch site (score: 4)
tttttatct putative PPT
tatactaagtattttt TA-rich tract