Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|58685596|gb|CK074283.1|CK074283EST: TCAGGAAGCTAGGAGGTTCATGATCTATGTCCACACCAAAATGATGATAG TTGACGATGAGTACATCATCATCGGTTCTGCAAACATCAACCAGAGGTCGA
genomic: TCAGGAAGCTAGGAGGTTCATGATCTATGTCCACACCAAAATGATGATAGgtaccgagtg ... ccattttcagTTGACGATGAGTACATCATCATCGGTTCTGCAAACATCAACCAGAGGTCGA
EST:
gi|29626348|gb|CB631359.1|CB631359EST: AGGAGGTTCATGATCTATGTCCACACCAAAATGATGATAG TTGACGATGAGTACATCATCATCGGTTCTGCAAACATCAACCAGAGGTCGA
genomic: AGGAGGTTCATGATCTATGTCCACACCAAAATGATGATAGgtaccgagtg ... ccattttcagTTGACGATGAGTACATCATCATCGGTTCTGCAAACATCAACCAGAGGTCGA
EST:
gi|218487196|gb|FG969108.1|FG969108EST: TCAGGAAGCTAGGAGGTTCATGATCTATGTCCACACCAAAATGATGATAG TTGACGATGAGTACATCATCATCGGTTCTGCAAACATCAACCAGAGGTCGA
genomic: TCAGGAAGCTAGGAGGTTCATGATCTATGTCCACACCAAAATGATGATAGgtaccgagtg ... ccattttcagTTGACGATGAGTACATCATCATCGGTTCTGCAAACATCAACCAGAGGTCGA
EST:
gi|86830886|gb|CI293845.1|CI293845EST: TCAGGAAGCTAGGAGGTTCATGATCTATGTCCACACCAAAATGATGATAG TTGACGATGAGTACATCATCATCGGT
genomic: TCAGGAAGCTAGGAGGTTCATGATCTATGTCCACACCAAAATGATGATAGgtaccgagtg ... ccattttcagTTGACGATGAGTACATCATCATCGGT
EST:
gi|218487379|gb|FG968040.1|FG968040EST: TCAGGAAGCTAGGAGGTTCATGATCTATGTCCACACCAAAATGATGATAG TTGACGATGAGTACATCATCATCGGTTCTGCAAACATCAACCAGAGGTCGA
genomic: TCAGGAAGCTAGGAGGTTCATGATCTATGTCCACACCAAAATGATGATAGgtaccgagtg ... ccattttcagTTGACGATGAGTACATCATCATCGGTTCTGCAAACATCAACCAGAGGTCGA
EST:
gi|38473027|gb|CF957159.1|CF957159EST: TCAGGAAGCTAGGAGGTTCATGATCTATGTCCACACCAAAATGATGATAG TTGACGATGAGTACATCATCATCGGTTCTGCAAACATCAACCAGAGGTCGA
genomic: TCAGGAAGCTAGGAGGTTCATGATCTATGTCCACACCAAAATGATGATAGgtaccgagtg ... ccattttcagTTGACGATGAGTACATCATCATCGGTTCTGCAAACATCAACCAGAGGTCGA
EST:
gi|38476553|gb|CF960686.1|CF960686EST: ATCTATGTCCACACCAAAATGATGATAG TTGACGATGAGTACATCATCATCGGTTCGTG-GGACATCAACCAGAGGTCG
genomic: ATCTATGTCCACACCAAAATGATGATAGgtaccgagtg ... ccattttcagTTGACGATGAGTACATCATCATCGGTTC-TGCAAACATCAACCAGAGGTCG
EST:
gi|38474412|gb|CF958544.1|CF958544EST: TCAGGAAGCTAGGAGGTTCATGATCTATGTCCACACCAAAATGATGATAG TTGACGATGAGTACATCATCATCGGTTCTGCAAACATCAACCAGAGGTCGA
genomic: TCAGGAAGCTAGGAGGTTCATGATCTATGTCCACACCAAAATGATGATAGgtaccgagtg ... ccattttcagTTGACGATGAGTACATCATCATCGGTTCTGCAAACATCAACCAGAGGTCGA
EST:
gi|218489071|gb|FG948414.1|FG948414EST: TCAGGAAGCTAGGAGGTTCATGATCTATGTCCACACCAAAATGATGATAG TTGACGATGAGTACATCATCATCGGTTCTGCAAACATCAACCAGAGGTCGA
genomic: TCAGGAAGCTAGGAGGTTCATGATCTATGTCCACACCAAAATGATGATAGgtaccgagtg ... ccattttcagTTGACGATGAGTACATCATCATCGGTTCTGCAAACATCAACCAGAGGTCGA
EST:
gi|58679448|gb|CK068135.1|CK068135EST: TCAGGAAGCTAGGAGGTTCATGATCTATGTCCACACCAAAATGATGATAG TTGACGATGAGTACATCATCATCGGTTCTGCAAACATCAACCAGAGGTCGA
genomic: TCAGGAAGCTAGGAGGTTCATGATCTATGTCCACACCAAAATGATGATAGgtaccgagtg ... ccattttcagTTGACGATGAGTACATCATCATCGGTTCTGCAAACATCAACCAGAGGTCGA
EST:
gi|58682564|gb|CK071251.1|CK071251EST: TCAGGAAGCTAGGAGGTTCATGATCTATGTCCACACCAAAATGATGATAG TTGACGATGAGTACATCATCATCGGTTCTGCAAACATCAACC
genomic: TCAGGAAGCTAGGAGGTTCATGATCTATGTCCACACCAAAATGATGATAGgtaccgagtg ... ccattttcagTTGACGATGAGTACATCATCATCGGTTCTGCAAACATCAACC
EST:
gi|33794256|gb|CF323018.1|CF323018EST: TCAGGAAGCTAGGAGGTTCATGATCTATGTCCACACCAAAATGATGATAG TTGACGATGAGTACATCATCATCGGTTCTGC
genomic: TCAGGAAGCTAGGAGGTTCATGATCTATGTCCACACCAAAATGATGATAGgtaccgagtg ... ccattttcagTTGACGATGAGTACATCATCATCGGTTCTGC
EST:
gi|29621008|gb|CB626019.1|CB626019EST: TCAGGAAGCTAGGAGGTTCATGATCTATGTCCACACCAAAATGATGATAG TTGACGATGAGTACATCATCATCGGTTCTGCAAACATCAACCAGAGGTCGA
genomic: TCAGGAAGCTAGGAGGTTCATGATCTATGTCCACACCAAAATGATGATAGgtaccgagtg ... ccattttcagTTGACGATGAGTACATCATCATCGGTTCTGCAAACATCAACCAGAGGTCGA
EST:
gi|88269319|gb|CI380617.1|CI380617EST: TCAGGAAGCTAGGAGGTTCATGATCTATGTCCACACCAAAATGATGATAG TTGACGATGAGTACATCATCATCGGTTCTGCAAACATCAACCAGAGGTCGA
genomic: TCAGGAAGCTAGGAGGTTCATGATCTATGTCCACACCAAAATGATGATAGgtaccgagtg ... ccattttcagTTGACGATGAGTACATCATCATCGGTTCTGCAAACATCAACCAGAGGTCGA
EST:
gi|58612890|gb|CK040602.1|CK040602EST: TCAGGAAGCTAGGAGGTTCATGATCTATGTCCAAACCAAAATGATGATAG TTGACGATGAGTACATCATCATCG
genomic: TCAGGAAGCTAGGAGGTTCATGATCTATGTCCACACCAAAATGATGATAGgtaccgagtg ... ccattttcagTTGACGATGAGTACATCATCATCG
EST:
gi|218497667|gb|FG965117.1|FG965117EST: TCA-GAAGCTAGGAGGTTCATGATCTATGTCCACACCAAAATGATGATAG TTGACGATGAGTACATCATCATCGGTTCTGCAAACATCAACCAGAGGTCGA
genomic: TCAGGAAGCTAGGAGGTTCATGATCTATGTCCACACCAAAATGATGATAGgtaccgagtg ... ccattttcagTTGACGATGAGTACATCATCATCGGTTCTGCAAACATCAACCAGAGGTCGA
EST:
gi|29616250|gb|CB621262.1|CB621262EST: TCAGGAAGCTAGGAGGTTCATGATCTATGTCCACACCAAAATGATGATAG TTGACGATGAGTACATCATCATCGGTTCTGCAAACATCAACCAGAGGTCGA
genomic: TCAGGAAGCTAGGAGGTTCATGATCTATGTCCACACCAAAATGATGATAGgtaccgagtg ... ccattttcagTTGACGATGAGTACATCATCATCGGTTCTGCAAACATCAACCAGAGGTCGA
EST:
gi|58590246|gb|CF988554.1|CF988554EST: TCAGGAAGCTAGGAGGTTCATGATCTATGTCCACACCAAAATGATGATAG TTGACGATGAGTACATCATCATCGGTTCTGCAAACATCAACCAGAGGTCGA
genomic: TCAGGAAGCTAGGAGGTTCATGATCTATGTCCACACCAAAATGATGATAGgtaccgagtg ... ccattttcagTTGACGATGAGTACATCATCATCGGTTCTGCAAACATCAACCAGAGGTCGA
EST:
gi|29626457|gb|CB631468.1|CB631468EST: AATGATGATAG TTGACGATGAGTACATCATCATCGGTTCTGCAAACATCAACCAGAGGTCGA
genomic: AATGATGATAGgtaccgagtg ... ccattttcagTTGACGATGAGTACATCATCATCGGTTCTGCAAACATCAACCAGAGGTCGA
EST:
gi|88255535|gb|CI354359.1|CI354359EST: TCAGGAAGCTAGGAGGTTCATGATCTATGTCCACACCAAAATTATGATAG TTGACGATGAGTACATCATCATCGGTTCTGCAAACATCAACCAGAGGTCGA
genomic: TCAGGAAGCTAGGAGGTTCATGATCTATGTCCACACCAAAATGATGATAGgtaccgagtg ... ccattttcagTTGACGATGAGTACATCATCATCGGTTCTGCAAACATCAACCAGAGGTCGA
EST:
gi|29643707|gb|CB648714.1|CB648714EST: GAGGTTCATGATCTATGTCCACACCAAAATGATGATAG TTGACGATGAGTACATCATCATCGGTTCTGCAAACATCAACCAGAGGTCGA
genomic: GAGGTTCATGATCTATGTCCACACCAAAATGATGATAGgtaccgagtg ... ccattttcagTTGACGATGAGTACATCATCATCGGTTCTGCAAACATCAACCAGAGGTCGA
EST:
gi|86825009|gb|CI358190.1|CI358190EST: TCAGGAAGCTAGGAGGTTCATGATCTATGTCCACACCAAAATGATGATAG TTGACGATGAGTACATCATCATCGGTTCTGCAAACATCAACCAGAGGTCGA
genomic: TCAGGAAGCTAGGAGGTTCATGATCTATGTCCACACCAAAATGATGATAGgtaccgagtg ... ccattttcagTTGACGATGAGTACATCATCATCGGTTCTGCAAACATCAACCAGAGGTCGA
EST:
gi|29677240|gb|CB673515.1|CB673515EST: AATGATGATAG TTGACGATGAGTACATCATCATCGGTTCTGCAAACATCAACCAGAGGTCGA
genomic: AATGATGATAGgtaccgagtg ... ccattttcagTTGACGATGAGTACATCATCATCGGTTCTGCAAACATCAACCAGAGGTCGA
EST:
gi|38476242|gb|CF960375.1|CF960375EST: TCAGGAAGCTAGGAGGTTCATGATCTATGTCCACACCAAAATGATGATAG TTGACGATGAGTACATCATCAGCGGTTCTGCAAACATCAACCAGAGGTCGA
genomic: TCAGGAAGCTAGGAGGTTCATGATCTATGTCCACACCAAAATGATGATAGgtaccgagtg ... ccattttcagTTGACGATGAGTACATCATCATCGGTTCTGCAAACATCAACCAGAGGTCGA
RNA-Seq data
ATGC Supported by RNA-Seq exonic block that spans over the splice site
atgs Truncated intron sequence
Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.
Found data for 1 RNA-Seqlibrary.
Block sizes:
75 (upstream exon),
69 (downstream exon)
Score:
17GAATATCAGCCTGAAGAACAACCAGAAGCTGACACTGATTACAGCCGAGCTCAGGAAGCTAGGAGGTTCATGATCTATGTCCACACCAAAATGATGATAGgtaccgagtg ... ccattttcagTTGACGATGAGTACATCATCATCGGTTCTGCAAACATCAACCAGAGGTCGATGGACGGCGCTAGGGACTCTGAGATCGCCATGGGCGGGTACCAGCCATA
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