Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|88670451|gb|CI724567.1|CI724567EST: CGCGCTGCTCGCCGCCAGCCACACCGTCCGCGCCACCGTCAGAGACCCAG AGGATGAAGCCAAGGTGGGGTTCCTATGGGAGCTTGATGGCGCGAGCGAGC
genomic: CGCGCTGCTCGCCGCCAGCCACACCGTCCGCGCCACCGTCAGAGACCCAGgtaacacgca ... gtgcatgcagAGGATGAAGCCAAGGTGGGGTTCCTATGGGAGCTTGATGGCGCGAGCGAGC
EST:
gi|88672829|gb|CI726945.1|CI726945EST: CGCGCTGCTCGCCGCCAGCCACACCGTCCGCGCCACCGTCAGAGACCCAG AGGATGAAGCCAAGGTGGGGTTCCTATGGGAGCTTGATGGCGCGAGCGAGC
genomic: CGCGCTGCTCGCCGCCAGCCACACCGTCCGCGCCACCGTCAGAGACCCAGgtaacacgca ... gtgcatgcagAGGATGAAGCCAAGGTGGGGTTCCTATGGGAGCTTGATGGCGCGAGCGAGC
EST:
gi|88667040|gb|CI719176.1|CI719176EST: CGCGCTGCTCGCCGCCAGCCACACCGTCCGCGCCACCGTCAGAGACCCAG AGGATGAAGCCAAGGTGGGGTTCCTATGGGAGCTTGATGGCGCGAGCGAGC
genomic: CGCGCTGCTCGCCGCCAGCCACACCGTCCGCGCCACCGTCAGAGACCCAGgtaacacgca ... gtgcatgcagAGGATGAAGCCAAGGTGGGGTTCCTATGGGAGCTTGATGGCGCGAGCGAGC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GAGTACTGCGTCACCGGCGGGACGGGGTTCATCGCGTCGCACCTCATCCGCGCGCTGCTCGCCGCCAGCCACACCGTCCGCGCCACCGTCAGAGACCCAGgtaacacgcacgcacacttgcgccgttgaggcaaatgatcgaacacgacgtatgcacgtctgagatctgagcatgtgtgcatgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT