1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
CGACAAGAAAGGGGAGTCGGCTCGTCGCAGCCCCTACGGTGGCAGGTGGGCAGGGGAGAAAGGGGAGTTTCCGTCCGTGGAGCGGCATCGATCTCGTCAGgtgagccgcgtgagcgatgtcgagggactacagacgccggcggcttcggaggagggggcgagaaggagtaaattgctcagccgcacatgcttgctctccccaaaactggccatctatctagcctgtctcacccatccctttcttcctggcatttgcag
species | Oryza sativa |
transcript | LOC_Os01g02490.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CAGGGGAGAAAGGGGAGTTTCCGTCCGTGGAGCGGCATCGATCTCGTCAG GATGCAAGATCGAGACACATCTGATTGCTGGAGAGTCCAAACACATCTGATEST: gi|88382387|gb|CI633245.1|CI633245
genomic: CAGGGGAGAAAGGGGAGTTTCCGTCCGTGGAGCGGCATCGATCTCGTCAGgtgagccgcg ... gcatttgcagGATGCAAGATCGAGACACATCTGATTGCTGGAGAGTCCAAACACATCTGAT
EST: CAGGGGAGAAAGGGGAGTTTCCGTCCGTGGAGCGGCATCGATCTCGTCAG GATGCAAGATC
genomic: CAGGGGAGAAAGGGGAGTTTCCGTCCGTGGAGCGGCATCGATCTCGTCAGgtgagccgcg ... gcatttgcagGATGCAAGATC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGACAAGAAAGGGGAGTCGGCTCGTCGCAGCCCCTACGGTGGCAGGTGGGCAGGGGAGAAAGGGGAGTTTCCGTCCGTGGAGCGGCATCGATCTCGTCAGgtgagccgcgtgagcgatgtcgagggactacagacgccggcggcttcggaggagggggcgagaaggagtaaattgctcagccgcacatgcttgctctccccaaaactggccatctatctagcctgtctcacccatccctttcttcctggcatttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG