1 5' 3' | 2 5' 3' |
AGAAGCAATATCTCCGTCGTTGCCAAGCTGAAGgtaatgccacatttctctcattactctacttttagattcgttttggtctccctagttcacatttagcccccatttagttaacttctccatatgaaaataa...
species | Glycine max |
transcript | GLYMA20G39410.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: AGAAGCAATATCTCCGTCGTTGCCAAGCTGGAG GTGTGACTAACGAGAAACTGTEST: gi|51335136|gb|CO979002.1|CO979002
genomic: AGAAGCAATATCTCCGTCGTTGCCAAGCTGAAGgtaatgccac ... tattctacagGTGTGACTAACGAGAAACTGT
EST: AGAAGCAATATCTCCGTCGTTGCCAAGCTGAAG GTGTGACTAACGAGAAACTGTCTACTTCAAATCCAGAAATGGGTTCTACTT
genomic: AGAAGCAATATCTCCGTCGTTGCCAAGCTGAAGgtaatgccac ... tattctacagGTGTGACTAACGAGAAACTGTCTACTTCAAATCCAGAAATGGGTTCTACTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGAAGCAATATCTCCGTCGTTGCCAAGCTGAAGgtaatgccacatttctctcattactctacttttagattcgttttggtctccctagttcacatttagcccccatttagttaacttctccatatgaaaataa
- AAGCAA
- - - - - - - - - - - CAAGCT
- - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - AGCTGA
- - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tctcccta
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cccccat