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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGTCTCACACTGGACCGGGTGTTGTTAGCATGGCAAATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtattcctcttcttcataacagcatgccacataagaggattaaatgagaaatatgctttatttctaactttatcattcctgcctttaaaaaact...

Basic information

species Glycine max
transcript GLYMA20G39340.2
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|214008897|gb|DB987875.1|DB987875
EST:     ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAG                         ACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
genomic: ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
EST: gi|209726504|gb|BW662842.1|BW662842
EST:     ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAG                         ACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
genomic: ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
EST: gi|22927630|gb|BU544769.1|BU544769
EST:     ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAG                         ACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
genomic: ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
EST: gi|31474302|gb|CD416330.1|CD416330
EST:     ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAG                         ACACCTTGGCTGGATCAGAGACATGTAGTATTTGGNCAAGTTTTGGAAGGC
genomic: ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
EST: gi|151399950|gb|EV269821.1|EV269821
EST:     ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAG                         ACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAG-C
genomic: ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
EST: gi|27425339|gb|CA936859.1|CA936859
EST:     ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAG                         ACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
genomic: ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
EST: gi|193421466|gb|FK389625.1|FK389625
EST:     ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAG                         ACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
genomic: ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
EST: gi|21678092|gb|BQ630443.1|BQ630443
EST:     ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAG                         ACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
genomic: ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
EST: gi|151403840|gb|EV273650.1|EV273650
EST:     ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAG                         ACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
genomic: ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
EST: gi|254337627|gb|GR849473.1|GR849473
EST:     ATGCAG-ACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAG                         ACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAG
genomic: ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAG
EST: gi|9899901|gb|BE608869.1|BE608869
EST:     ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAG                         ACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
genomic: ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
EST: gi|193702461|gb|FK640909.1|FK640909
EST:     ATGCAGGACCCAACACAAATGGGAGTCAGTCTTTCATATGCACTGTCAAG                         ACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
genomic: ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
EST: gi|209714759|gb|BW654109.1|BW654109
EST:     ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAG                         ACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
genomic: ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
EST: gi|31473399|gb|CD415412.1|CD415412
EST:     ATGCAGGACCCTACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAG                         ACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
genomic: ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
EST: gi|209714760|gb|BW654110.1|BW654110
EST:     AGTCAGTTTTTCATATGCACTGTCAAG                         ACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
genomic: AGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
EST: gi|209706050|gb|BW653379.1|BW653379
EST:     ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAG                         ACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
genomic: ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
EST: gi|23052950|gb|BU577441.1|BU577441
EST:     ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAG                         ACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
genomic: ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
EST: gi|16284153|gb|BI945934.1|BI945934
EST:     ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAG                         ACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
genomic: ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
EST: gi|213592211|gb|DB977074.1|DB977074
EST:     ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAG                         ACACCTTGGCTGTTTCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
genomic: ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
EST: gi|151403534|gb|EV273344.1|EV273344
EST:     ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAG                         ACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
genomic: ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
EST: gi|192300966|gb|FG993026.1|FG993026
EST:     ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAG                         ACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
genomic: ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
EST: gi|16342966|gb|BI968561.1|BI968561
EST:     ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAG                         ACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
genomic: ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
EST: gi|31457505|gb|CD399533.1|CD399533
EST:     ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAG                         ACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
genomic: ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
EST: gi|8284841|gb|BE022400.1|BE022400
EST:     ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAG                         ACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
genomic: ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
EST: gi|11413868|gb|BF425879.1|BF425879
EST:     ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAG                         ACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
genomic: ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
EST: gi|8669575|gb|BE190682.1|BE190682
EST:     ACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAG                         ACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
genomic: ACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
EST: gi|214009322|gb|DB990612.1|DB990612
EST:     GCA-G-CCCTTATCACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAG                         ACACCTTGGCT-GATTCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGG
genomic: GCAGGACCC--AACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTTGGCTGGA-TCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGG
EST: gi|214007419|gb|DB986271.1|DB986271
EST:     ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAG                         ACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
genomic: ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
EST: gi|209706049|gb|BW653378.1|BW653378
EST:     ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAG                         ACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
genomic: ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
EST: gi|209705904|gb|BW676009.1|BW676009
EST:     ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAG                         ACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
genomic: ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
EST: gi|209727742|gb|BW658662.1|BW658662
EST:     GACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAG                         ACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
genomic: GACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
EST: gi|209726969|gb|BW675371.1|BW675371
EST:     ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAG                         ACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
genomic: ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
EST: gi|151407379|gb|EV277194.1|EV277194
EST:     ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAG                         ACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAG-C
genomic: ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
EST: gi|193452050|gb|FK418456.1|FK418456
EST:     ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAG                         ACACCTTGGCTGGATCAGAGACAT
genomic: ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTTGGCTGGATCAGAGACAT
EST: gi|10238198|gb|BE807086.1|BE807086
EST:     ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAG                         ACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
genomic: ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
EST: gi|31472634|gb|CD414662.1|CD414662
EST:     ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAG                         ACACCTNGGCTGGATNAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
genomic: ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
EST: gi|17153970|gb|BM143903.1|BM143903
EST:     ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAG                         ACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
genomic: ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
EST: gi|193361333|gb|FK328651.1|FK328651
EST:     ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAG                         ACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
genomic: ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
EST: gi|214008657|gb|DB988234.1|DB988234
EST:     ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAG                         ACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
genomic: ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
EST: gi|192293856|gb|FG986065.1|FG986065
EST:     ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAG                         ACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAAGC
genomic: ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
EST: gi|16282175|gb|BI944876.1|BI944876
EST:     ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAG                         ACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
genomic: ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
EST: gi|151411656|gb|EV281467.1|EV281467
EST:     ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAG                         ACACCTCGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
genomic: ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
EST: gi|214005657|gb|DB989739.1|DB989739
EST:     ATGCAGGACCCAACACAAATGGCAGTCAGTTTTTCATATGCACTGTCAAG                         ACACCTTCGG-TGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGG
genomic: ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTT-GGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGG
EST: gi|21889679|gb|BQ742892.1|BQ742892
EST:     ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAG                         ACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
genomic: ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
EST: gi|31470145|gb|CD412173.1|CD412173
EST:     ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAG                         ACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
genomic: ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
EST: gi|16281004|gb|BI944264.1|BI944264
EST:     ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAG                         ACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC
genomic: ATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtat ... gaattggcagACACCTTGGCTGGATCAGAGACATGTAGTATTTGGGCAAGTTTTGGAAGGC

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
TGTCTCACACTGGACCGGGTGTTGTTAGCATGGCAAATGCAGGACCCAACACAAATGGGAGTCAGTTTTTCATATGCACTGTCAAGgtaggtgtattcctcttcttcataacagcatgccacataagaggattaaatgagaaatatgctttatttctaactttatcattcctgcctttaaaaaact

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