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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gttgaagctctccttgatgactatgatctcctccaatatccagATGGATCTTTTCCTGCGCCATCAGAAACGATCCTCACCGCTCCAACATCTTCGACGCCGACTCC

Basic information

species Glycine max
transcript GLYMA20G39310.1
intron # 1
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

gttgaagctctccttgatgactatgatctcctccaatatccagATGGATCTTTTCCTGCGCCATCAGAAACGATCCTCACCGCTCCAACATCTTCGACGCCGACTCC
                       ccttgat  putative branch site (score: 5)
                                      tctcctcc  putative PPT
                                              aatat  TA-rich tract