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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AAGTCGCAGGCCACTACCCTCAGGACGCATCACAATACCTCATGCAGTTGGCTGGGCATCCTCTGTTGGATTAGCTGGTACGGCTCTACTAGCTACGCAGgtattgaaacaaatttgcgtactttgttgattgtatgcttttctagtgtaacttgtaaacctatgactggatttcttataattgtttgatgtgctttgagtggagggactaacattgcagctttatgacaaggttattccag

Basic information

species Glycine max
transcript GLYMA20G38710.1
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|5820336|gb|AI988542.1|AI988542
EST:     GCTGGGCATCCTCTGTTGGATTAGCTGGTACGGCTCTACTAGCTACGCAG                         ACCAATATGTTAGCTGCTGGGCTTGCTGCTTCCAACCTAATTCTGTATGCA
genomic: GCTGGGCATCCTCTGTTGGATTAGCTGGTACGGCTCTACTAGCTACGCAGgtattgaaac ... gttattccagACCAATATGTTAGCTGCTGGGCTTGCTGCTTCCAACCTAATTCTGTATGCA
EST: gi|13252104|gb|BG363007.1|BG363007
EST:     GCTGGGCATCCTCTGTTGGATTAGCTGGTACGGCTCTACTAGCTACGCAG                         ACCAATATGTTAGCTGCTGGGCTTGCTGCTTCCAACCTAATTCTGTATGCA
genomic: GCTGGGCATCCTCTGTTGGATTAGCTGGTACGGCTCTACTAGCTACGCAGgtattgaaac ... gttattccagACCAATATGTTAGCTGCTGGGCTTGCTGCTTCCAACCTAATTCTGTATGCA