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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtcaggaagtttccatagtattgaaaattattaattaaattcatctaatagatgtttatacatggtggtactatgttgttattggctgtcctgtggtaaaaatggcttggtagttttttcaattgctattacttgagccttttgatcaatcccctgaaaaattattatgtcagATGTTGAAGAAAGATGAGAGTAGAAACTGCCTTCAAAATGATCTGCAAGAGTCTAACAGGGAATTGACTATCATGAGGGGAAAACTGCCCAAAGTGACAG

Basic information

species Glycine max
transcript GLYMA20G38680.1
intron # 5
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tcaattgctattacttgagccttttgatcaatcccctgaaaaattattatgtcagATGTTGAAGAAAGATGAGAGTAGAAACTGCCTTCAAAATGATCTGCAAGAGTCTAACAGGGAATTGACTATCATGAGGGGAAAACTGCCCAAAGTGACAG
                     ttttgat  putative branch site (score: 4)
                                    tgaaaaattattatgt  TA-rich tract