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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTTATATCATTTCACGGTTGTATGTTACCATGCCGCTTATCTTCCCCTGCTGTATATAACCTTCCTGGCTGACTTTTTTCAGgtcataatgcccttcacttaatgcctggggttcagtttttactagtcaaaccatgttattgtttgtagttaggacagtcttccttctttcattgatctgactagttgtagttattgtgatgattacag

Basic information

species Glycine max
transcript GLYMA20G37380.1
intron # 5
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|213610385|gb|DB984221.1|DB984221
EST:     CCGCTTATCTTCCCCTGCTGTATATAACCTTCCTGGCTGACTTTTTTCAG                         GAGGAAGATTTGCATTTGGAGAATGTGTACTACTCTGAAATGAAAGATGCC
genomic: CCGCTTATCTTCCCCTGCTGTATATAACCTTCCTGGCTGACTTTTTTCAGgtcataatgc ... atgattacagGAGGAAGATTTGCATTTGGAGAATGTGTACTACTCTGAAATGAAAGATGCC
EST: gi|10709486|gb|BF009210.1|BF009210
EST:     CCGCTTATCTTCCCCTGCTGTATATAACCTTCCTGGCTGACTTTNTTCAC                         GAGGAAGATTTGCATTTGGAGAATGTGTACTACTCTGAAATGAAAGATGCC
genomic: CCGCTTATCTTCCCCTGCTGTATATAACCTTCCTGGCTGACTTTTTTCAGgtcataatgc ... atgattacagGAGGAAGATTTGCATTTGGAGAATGTGTACTACTCTGAAATGAAAGATGCC