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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...tccttatggattatattactacattttattttagtttctttctgttatttctgcctgtttctttgttttgtgctaacaaaactaaaatcttttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGAAAGAATAGAGCTAAGAAGATTCGTGGAGTTAAGAAG

Basic information

species Glycine max
transcript GLYMA20G37190.2
intron # 3
splice site 3'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA20G37190.2 (Glycine max), 3'ss of exon 3
lower sequence: LOC_Os02g13530.1 (Oryza sativa), 3'ss of exon 2
-tccttatggattatattactacattttattttagtttctttctgttatttctgcctgtttctttgttttgtgctaacaaaactaaaatcttttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGAAAGAATAGAGCTAAGAAGATTCGTGGAGTTAAGAAG
 |    |||    |||| | |  |  |  |   |   | |    |    |  |   ||| | ||   ||| |  |        |     | |    | |||||||| || |  || || || ||||| ||  | ||||| ||||||||||| ||||| ||||| |||||||| ||||| || ||||||
ttttccatgatgcatatcaatttaactcgtgaaacactatgaaagcccatgttttatgtattttgtctttctcattttctttttgctgccatac-ctacagAATGGCCTCGCCACCAAGGTTGAGAAGTCTCGCAAGCAGATGAAGGAGAGGAAGAACAGAGCAAAGAAGATCCGTGGTGTGAAGAAG

upper sequence: GLYMA20G37190.2 (Glycine max), 3'ss of exon 3
lower sequence: LOC_Os01g52490.1 (Oryza sativa), 3'ss of exon 3
tccttatggattata-ttactacattttattttagtttctttctgttatttctgcctgtttctttgttttgtgctaacaaaactaaaatcttttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGAAAGAATAGAGCTAAGAAGATTCGTGGAGTTAAGAAG
|| || ||||    | |||     || ||| |  ||      |  | |||      | | |  ||  | |    | ||   | |    || ||| |  |||||||| |||| ||| || || ||||||||  | ||||||||||| ||  | ||||| |||||||||||||| ||||| || ||||||
tcgttgtggagagcaattaactagttgtatctgtgtccagcgccat-attctcctgtatgttgttcctgtaaatttacttcattttgttcctttttgtcagAATGGTCTTGCTACCAAGGTTGAGAAATCTCGCAAGCAAATGAAAGAACGCAAGAACAGAGCTAAGAAGATCCGTGGTGTCAAGAAG

upper sequence: GLYMA20G37190.2 (Glycine max), 3'ss of exon 3
lower sequence: GRMZM2G171426_T01 (Zea mays), 3'ss of exon 3
---tccttatggattatattactacattttattttagtttctttctgttatt--tctgcctgtttctttgttttgtgctaacaaaactaaaatcttttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGAAAGAATAGAGCTAAGAAGATTCGTGGAGTTAAGAAG
   | |      || |||||      || |||| ||  || |   ||  ||    |||   | |  |   | |  ||||        |    ||| || |  |||||||| |||| |||||| || ||||| ||  | ||||||||||||||| | ||||| || || |||||||| ||||| || ||||||
gcatgcccg-aaatgatattttattgttgtattgtaagttttgattgacatgaacctgatggatgttcactatactgctttt----ttgtgttctgttttgccagAATGGTCTTGCTACTAAGGTTGAGAAGTCCCGCAAGCAAATGAAGGAGCGGAAGAACAGGGCCAAGAAGATCCGTGGTGTCAAGAAG

upper sequence: GLYMA20G37190.2 (Glycine max), 3'ss of exon 3
lower sequence: AT5G28060.1 (Arabidopsis thaliana), 3'ss of exon 3
---------------------------tccttatggattatattactacattttattttagtttctttctgttatttctgcct--gtttctttgttttgtgctaacaaaactaaaatcttttattg----------------------cagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGAAAGAATAGAGCTAAGAAGATTCGTGGAGTTAAGAAG
                           |   ||    || |  | |||  ||||| | ||| ||  |  || |  ||     |    | |||||   ||    ||      |  |||||  || ||                      |||||||||||||| || ||  | |||||||||||||| || || |||||||| ||||| || || |||||||| ||||| |||||||||
gtaatttctctttacttgtttgatagttaagtaaaacttttggttctagtttttagtctagcttactcttggtgctttgattttcactgctttgcgatgaaacaatggtgttgcaatctcatactgaaatgattgttgatgtgattgacagAATGGACTTGACACCAAGATTGAGAAATCAAGGAAACAGATCAAGGAGAGGAAGAACAGGGCGAAGAAGATCCGTGGTGTTAAGAAG

upper sequence: GLYMA20G37190.2 (Glycine max), 3'ss of exon 3
lower sequence: AT3G04920.1 (Arabidopsis thaliana), 3'ss of exon 3
------------------------------------------------------------------------------------------------tccttatggattatattactacattttattttagtttctttctgttatttctgcctgtttctttgttttgtgctaacaaaactaaaatcttttattg-cagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGAAAGAATAGAGCTAAGAAGATTCGTGGAGTTAAGAAG
                                                                                                   ||||    ||| | |  |  ||     ||  | || |  ||   ||  ||     | | |  || |     ||||    |    | | |  ||| |||||||||||||| |||||  | ||||| |||||||| ||||| ||||| || ||||| || || ||||| || ||||| |||||||||
gtaaatgctttttccactcttgtttccattgttatatattgctactcacattgacccgtcttaaatcattactcttgctcattactgtttgtctgaaaattataagctatgtgataagtttcggactttatatcgtattgcacttggtgttctctgcatctttatacttaaacatgctttgtctatgtggttggcagAATGGACTTGACACTAAGATTGAGAAGTCAAGGAAACAAATTAAGGAAAGGAAGAACAGGGCGAAGAAAATCCGTGGTGTTAAGAAG

upper sequence: GLYMA20G37190.2 (Glycine max), 3'ss of exon 3
lower sequence: Vv14s0030g01620.t01 (Vitis vinifera), 3'ss of exon 3
--tccttatggattatattactacattttattttagtttctttctgttatttctgcctgtttctttgttttgtgctaacaaaactaaaatcttttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGAAAGAATAGAGCTAAGAAGATTCGTGGAGTTAAGAAG
  |    |   || |  |       |||| ||| |  ||   |        |||  ||    | || | || |   |   ||  |    | |||  | |||||||||| | ||||| || || ||||| || |||||||||||||||||||| ||||||||  | |||||| | || || || ||||||
tttttaaaaaaatcacgtcttccttttttctttgaactttaattgccctcctctctctaccccattttcttcttgcattgaatttgc--tgtttggtggcagAATGGATTGGATACCAAGGTCGAGAAGTCTAGGAAGCAAATGAAGGAGAGGAAGAATAGGTCCAAGAAGGTCCGAGGTGTAAAGAAG

upper sequence: GLYMA20G37190.2 (Glycine max), 3'ss of exon 3
lower sequence: Vv07s0151g00900.t01 (Vitis vinifera), 3'ss of exon 3
---tccttatggattatattactac---attttattttagtttctttctgttatttctgcc-tgtttctttgttttgtgctaacaaaactaaaatcttttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGAAAGAATAGAGCTAAGAAGATTCGTGGAGTTAAGAAG
    |  | |  | |   | |  |    || |||| || | ||  || || ||||     | || |||| | | |    || || | |  ||  | | |    |||||||||| | ||||| || || || || |||||||||||||||||||| || ||||| || || |||||| | || ||||| ||||||
acaacaatgtacacttagtgaacaaggaatcttatctt-gctttattttgctattcgaaacatgcttctctttct----ctgaccatagcaacttgtctg--cgcagAATGGATTGGATACCAAGGTGGAAAAGTCAAGGAAGCAAATGAAGGAAAGGAAGAACAGGGCCAAGAAGGTCCGAGGAGTGAAGAAG

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|13251998|gb|BG362901.1|BG362901
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|193611659|gb|FK560864.1|FK560864
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTA
EST: gi|31470717|gb|CD412745.1|CD412745
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCCAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|15337472|gb|BI498128.1|BI498128
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|193647660|gb|FK593573.1|FK593573
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATACAAAGGAAGCAAATGAA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAAT-CAA-GGAAGCAAATGAA
EST: gi|298168325|gb|HO014500.1|HO014500
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|7684915|gb|AW755563.1|AW755563
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCCAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|298171437|gb|HO016469.1|HO016469
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|6913093|gb|AW394623.1|AW394623
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|192303060|gb|FG994178.1|FG994178
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|298183538|gb|HO028751.1|HO028751
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|13480907|gb|BG510250.1|BG510250
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCCAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|298196305|gb|HO044696.1|HO044696
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|193325398|gb|FK291830.1|FK291830
EST:     TTCAGTTGAGAATGCCAAGTAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATAGGACTTGATACTAA
genomic: TTCAGTTGAGAATGCCAAG-AAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAAT-GGACTTGATACTAA
EST: gi|58015295|gb|CX702037.1|CX702037
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|298197659|gb|HO045138.1|HO045138
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|298180323|gb|HO025524.1|HO025524
EST:     ATTCAGTTGAGGATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|254315877|gb|GR825686.1|GR825686
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|192295557|gb|FG988131.1|FG988131
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCCAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|22929874|gb|BU547013.1|BU547013
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCCAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|213594139|gb|DB961971.1|DB961971
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|16341702|gb|BI967297.1|BI967297
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|17023150|gb|BM094184.1|BM094184
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCCAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|4396941|gb|AI495938.1|AI495938
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAG
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAG
EST: gi|151408628|gb|EV278436.1|EV278436
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTGAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|4397467|gb|AI496464.1|AI496464
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|6567197|gb|AW234810.1|AW234810
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|151412859|gb|EV282671.1|EV282671
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|7684924|gb|AW755572.1|AW755572
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCCAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|298198208|gb|HO039747.1|HO039747
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|193377428|gb|FK338810.1|FK338810
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|18040612|gb|BM308906.1|BM308906
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCCAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|208106456|gb|GD905573.1|GD905573
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATA
EST: gi|6746760|gb|AW317148.1|AW317148
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|21675284|gb|BQ627635.1|BQ627635
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|151394682|gb|EV264553.1|EV264553
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|151393827|gb|EV263702.1|EV263702
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|298187088|gb|HO034237.1|HO034237
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAGGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|192329057|gb|FK021102.1|FK021102
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|16346855|gb|BI972450.1|BI972450
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|298179658|gb|HO024873.1|HO024873
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|17964649|gb|BM271381.1|BM271381
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCCAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|209703210|gb|BW673344.1|BW673344
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|12773676|gb|BG238603.1|BG238603
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAATACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|151393772|gb|EV263647.1|EV263647
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|298164617|gb|HO014262.1|HO014262
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|298181502|gb|HO022941.1|HO022941
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|298180149|gb|HO025364.1|HO025364
EST:     ATTCAGTTGTGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|298184841|gb|HO030054.1|HO030054
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|298181663|gb|HO025838.1|HO025838
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|151410511|gb|EV280326.1|EV280326
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|193696996|gb|FK635310.1|FK635310
EST:     GTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: GTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|298166656|gb|HO010095.1|HO010095
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|57575636|gb|CX548611.1|CX548611
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|298164687|gb|HO014332.1|HO014332
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|298190911|gb|HO038390.1|HO038390
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|298192974|gb|HO033419.1|HO033419
EST:     ATTCAGTTGAGAATGCTAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|209703211|gb|BW673345.1|BW673345
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|192323207|gb|FK016338.1|FK016338
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|7146365|gb|AW508287.1|AW508287
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|151396885|gb|EV266758.1|EV266758
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|5126552|gb|AI748288.1|AI748288
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATA
EST: gi|13791434|gb|BG654025.1|BG654025
EST:     GTTGAGAATGCCAAGAAGTACGAGCCCAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: GTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|298164907|gb|HO010904.1|HO010904
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|7924600|gb|AW830626.1|AW830626
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|298182200|gb|HO026375.1|HO026375
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|151411910|gb|EV281721.1|EV281721
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|298188866|gb|HO035559.1|HO035559
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|9899853|gb|BE608821.1|BE608821
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAGAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|298184402|gb|HO029615.1|HO029615
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|151401691|gb|EV271504.1|EV271504
EST:     ATTCAGTTGAGAATGCCAAGAGGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|254329644|gb|GR839197.1|GR839197
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|298188957|gb|HO035650.1|HO035650
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|192315513|gb|FK007803.1|FK007803
EST:     ATTCTGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|298177418|gb|HO023551.1|HO023551
EST:     ATTCAGTTGAGAACGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGCAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|298179020|gb|HO024755.1|HO024755
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|192303061|gb|FG994179.1|FG994179
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|298181423|gb|HO022862.1|HO022862
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|298192673|gb|HO033107.1|HO033107
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGT
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGT
EST: gi|24136103|gb|BU926613.1|BU926613
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCCAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|58015615|gb|CX702357.1|CX702357
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|298192684|gb|HO033118.1|HO033118
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAGGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|13790809|gb|BG653400.1|BG653400
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|298167320|gb|HO010759.1|HO010759
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|15203913|gb|BI426681.1|BI426681
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|192327102|gb|FK015494.1|FK015494
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|7029074|gb|AW458857.1|AW458857
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|298168842|gb|HO009772.1|HO009772
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|254315878|gb|GR825687.1|GR825687
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|193390968|gb|FK353752.1|FK353752
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|26059860|gb|CA802774.1|CA802774
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
EST: gi|21887486|gb|BQ740699.1|BQ740699
EST:     ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGG                         AATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA
genomic: ATTCAGTTGAGAATGCCAAGAAGTACGAGCCTAAGTACAGGCTTATCAGGgtgagttatt ... tttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGA


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

tatttctgcctgtttctttgttttgtgctaacaaaactaaaatcttttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGAAAGAATAGAGCTAAGAAGATTCGTGGAGTTAAGAAG
                                          tcttttatt  CT-rich tract
                            taacaaaactaaaatc  TA-rich tract
















Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
tccttatggattatattactacattttattttagtttctttctgttatttctgcctgtttctttgttttgtgctaacaaaactaaaatcttttattgcagAATGGACTTGATACTAAAGTAGAGAAATCAAGGAAGCAAATGAAGGAGAGAAAGAATAGAGCTAAGAAGATTCGTGGAGTTAAGAAG

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GTGGAG
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