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 5'  3'   		2  
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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CCTATAAACGCAAAGGGCTATTAGTCAACCTCGTAGTGGTACTGGTACTGTTGTCGGATCGAAAACCCTAAATTGAATTCGAATCAACAACATGCAGCAGgtaacaaaaaaaccctaataaatcttgagatcacactttgttatttcgacggattcatgtgaaagctgatctctttttatttattttttggggatccgaaaag

Basic information

species Glycine max
transcript GLYMA20G36840.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|209727380|gb|BW651928.1|BW651928
EST:     TAAATTGAATTCGAATCAACAACATGCAGCAG                         GGAGGAGGCTCGGAGACGGAAGTGACATGGGAGGACCAGCAGAACATCAAC
genomic: TAAATTGAATTCGAATCAACAACATGCAGCAGgtaacaaaaa ... atccgaaaagGGAGGAGGCTCGGAGACGGAAGTGACATGGGAGGACCAGCAGAACATCAAC
EST: gi|31473825|gb|CD415853.1|CD415853
EST:     GAAAACCCTAAATTGAATTCGAATCAACAACATGCAGCAG                         GGAGGAGGCTCGGAGACGGAAGTGACATGGGAGGACCAGCAGAACATCAAC
genomic: GAAAACCCTAAATTGAATTCGAATCAACAACATGCAGCAGgtaacaaaaa ... atccgaaaagGGAGGAGGCTCGGAGACGGAAGTGACATGGGAGGACCAGCAGAACATCAAC
EST: gi|192296333|gb|FG989786.1|FG989786
EST:     TTGTCGGATCGAAAACCCTAAATTGAATTCGAATCAACAACATGCAGCAG                         GGAGGAGGCTCGGAGACGGAAGTGACATGGGAGGACCAGCAGAACATCAAC
genomic: TTGTCGGATCGAAAACCCTAAATTGAATTCGAATCAACAACATGCAGCAGgtaacaaaaa ... atccgaaaagGGAGGAGGCTCGGAGACGGAAGTGACATGGGAGGACCAGCAGAACATCAAC
EST: gi|207811871|gb|GD783120.1|GD783120
EST:     TTGTCGGATCGAAAACCCTAAATTGAATTCGAATCAACAACATGCAGCAG                         GGAGGAGGCTCGGAGACGGAAGTGACATGGGAGGACCAGCAGAACATCAAC
genomic: TTGTCGGATCGAAAACCCTAAATTGAATTCGAATCAACAACATGCAGCAGgtaacaaaaa ... atccgaaaagGGAGGAGGCTCGGAGACGGAAGTGACATGGGAGGACCAGCAGAACATCAAC
EST: gi|254319229|gb|GR830577.1|GR830577
EST:     TTGTCGGATCGAAAACCCTAAATTGAATTCGAATCAACAACATGCAGCAG                         GGAGGAGGCTCGGAGACGGAAGTGACATGGGAGGACCAGCAGAACATCAAC
genomic: TTGTCGGATCGAAAACCCTAAATTGAATTCGAATCAACAACATGCAGCAGgtaacaaaaa ... atccgaaaagGGAGGAGGCTCGGAGACGGAAGTGACATGGGAGGACCAGCAGAACATCAAC
EST: gi|207807499|gb|GD777120.1|GD777120
EST:     TTGTCGGATCGAAAACCCTAAATTGAATTCGAATCAACAACATGCAGCAG                         GGAGGAGGCTCGGAGACGGAAGTGACATGGGAGGACCAGCAGAACATCAAC
genomic: TTGTCGGATCGAAAACCCTAAATTGAATTCGAATCAACAACATGCAGCAGgtaacaaaaa ... atccgaaaagGGAGGAGGCTCGGAGACGGAAGTGACATGGGAGGACCAGCAGAACATCAAC
EST: gi|209727379|gb|BW651927.1|BW651927
EST:     TTGTCGGATCGAAAACCCTAAATTGAATTCGAATCAACAACATGCAGCAG                         GGAGGAGGCTCGGAGACGGAAGTGACATGGGAGGACCAGCAGAACATCAAC
genomic: TTGTCGGATCGAAAACCCTAAATTGAATTCGAATCAACAACATGCAGCAGgtaacaaaaa ... atccgaaaagGGAGGAGGCTCGGAGACGGAAGTGACATGGGAGGACCAGCAGAACATCAAC
EST: gi|254319228|gb|GR830576.1|GR830576
EST:     TTGTCGGATCGAAAACCCTAAATTGAATTCGAATCAACAACATGCAGCAG                         GGAGGAGGCTCGGAGACGGAAGTGACATGGGAGGACCAGCAGAACATCAAC
genomic: TTGTCGGATCGAAAACCCTAAATTGAATTCGAATCAACAACATGCAGCAGgtaacaaaaa ... atccgaaaagGGAGGAGGCTCGGAGACGGAAGTGACATGGGAGGACCAGCAGAACATCAAC
EST: gi|151396125|gb|EV266002.1|EV266002
EST:     TTGTCGGATCGAAAACCCTAAATTGAATTCGAATCAACAACATGCAGCAG                         GGAGGAGGCTCGGAGACGGAAGTGACATGGGAGGACCAGCAGAACATCAAC
genomic: TTGTCGGATCGAAAACCCTAAATTGAATTCGAATCAACAACATGCAGCAGgtaacaaaaa ... atccgaaaagGGAGGAGGCTCGGAGACGGAAGTGACATGGGAGGACCAGCAGAACATCAAC
EST: gi|298174302|gb|HO017638.1|HO017638
EST:     GTCGGATCGAAAACCCTAAATTGAATTCGAATCAACAACATGCAGCAG                         GGAGGAGGCTCGGAGACGGAAGTGACATGGGAGGACCAGCAGAACATCAAC
genomic: GTCGGATCGAAAACCCTAAATTGAATTCGAATCAACAACATGCAGCAGgtaacaaaaa ... atccgaaaagGGAGGAGGCTCGGAGACGGAAGTGACATGGGAGGACCAGCAGAACATCAAC