1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
TATTCACCACATTCCTGGCCCCGAGGGTGTCCGAGGTCGTAATTCAGACAATACACTTATAAAAGAAAAACTTGGTTGGGCTCCAACTATGAGGTTGAAGgtaataatatcatgaattgggcgaacattatcttatttccactctatataatttgttccatgctcatattaagttctgtggaacagtcatagcttatagg...
species | Glycine max |
transcript | GLYMA20G36740.3 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: ATACACTTATAAAAGAAAAACTTGGTTGGGCTCCAACTATGAGGTTGAAG GATGGACTGAGGATCACATACTTCTGGATTAAGGAGCAGATCGAGAAGGAGEST: gi|58014352|gb|CX701094.1|CX701094
genomic: ATACACTTATAAAAGAAAAACTTGGTTGGGCTCCAACTATGAGGTTGAAGgtaataatat ... gatgttgtagGATGGACTGAGGATCACATACTTCTGGATTAAGGAGCAGATCGAGAAGGAG
EST: ATACACTTATAAAAGAAAAACTTGGTTGGGCTCCAACTATGAGGTTGAAG GATGGACTGAGGATCACATACTTCTGGATTAAGGAGCAGATCGAGAAGGAGEST: gi|31467396|gb|CD409424.1|CD409424
genomic: ATACACTTATAAAAGAAAAACTTGGTTGGGCTCCAACTATGAGGTTGAAGgtaataatat ... gatgttgtagGATGGACTGAGGATCACATACTTCTGGATTAAGGAGCAGATCGAGAAGGAG
EST: ATACACTTATAAAAGAAAAACTTGGTTGGGCTCCAACTATGAGGTTGAAG GATGGACTGAGGATCACATACTTCTGGATTAAGGAGCAGATCGAGAAAGAGEST: gi|58021262|gb|CX708004.1|CX708004
genomic: ATACACTTATAAAAGAAAAACTTGGTTGGGCTCCAACTATGAGGTTGAAGgtaataatat ... gatgttgtagGATGGACTGAGGATCACATACTTCTGGATTAAGGAGCAGATCGAGAAGGAG
EST: ATACACTTATAAAAGAAAAACTTGGTTGGGCTCCAACTATGAGGTTGAAG GATGGACTGAGGATCACATACTTCTGGATTAAGGAGCAGATCGAGAAGGAGEST: gi|33389464|gb|CA852671.1|CA852671
genomic: ATACACTTATAAAAGAAAAACTTGGTTGGGCTCCAACTATGAGGTTGAAGgtaataatat ... gatgttgtagGATGGACTGAGGATCACATACTTCTGGATTAAGGAGCAGATCGAGAAGGAG
EST: ATACACTTATAAAAGAAAAACTTGGTTGGGCTCCAACTATGAGGTTGAAG GATGGACTGAGGATCACATACTTCTGGATTAAGGAGCAGATCGAGAAAGAGEST: gi|192309347|gb|FK000555.1|FK000555
genomic: ATACACTTATAAAAGAAAAACTTGGTTGGGCTCCAACTATGAGGTTGAAGgtaataatat ... gatgttgtagGATGGACTGAGGATCACATACTTCTGGATTAAGGAGCAGATCGAGAAGGAG
EST: ATACACTTATAAAAGAAAAACTTGGTTGGGCTCCAACTATGAGGTTGAAG GATGGACTGAGGATCACATACTTTTGGATTAAGGAGCAGATCGAGAAGGAGEST: gi|9260013|gb|BE348160.1|BE348160
genomic: ATACACTTATAAAAGAAAAACTTGGTTGGGCTCCAACTATGAGGTTGAAGgtaataatat ... gatgttgtagGATGGACTGAGGATCACATACTTCTGGATTAAGGAGCAGATCGAGAAGGAG
EST: ATACACTTATAAAAGAAAAACTTGGTTGGGCTCCAACTATGAGGTTGAAG GATGGACTGAGGATCACATACTTCTGGATTAAGGAGCAGATCGAGAAGGAGEST: gi|13789611|gb|BG652202.1|BG652202
genomic: ATACACTTATAAAAGAAAAACTTGGTTGGGCTCCAACTATGAGGTTGAAGgtaataatat ... gatgttgtagGATGGACTGAGGATCACATACTTCTGGATTAAGGAGCAGATCGAGAAGGAG
EST: ATACACTTATAAAAGAAAAACTTGGTTGGGCTCCAACTATGAGGTTGAAG GATGGACTGAGGATCACATACTTCTGGATTAAGGAGCAGATCGAGAAGGAGEST: gi|58024414|gb|CX711155.1|CX711155
genomic: ATACACTTATAAAAGAAAAACTTGGTTGGGCTCCAACTATGAGGTTGAAGgtaataatat ... gatgttgtagGATGGACTGAGGATCACATACTTCTGGATTAAGGAGCAGATCGAGAAGGAG
EST: ATACACTTATAAAAGAAAAACTTGGTTGGGCTCCAACTATGAGGTTGAAG GATGGACTGAGGATCACATACTTCTGGATTAAGGAGCAGATCGAGAAGGAGEST: gi|31464858|gb|CD406871.1|CD406871
genomic: ATACACTTATAAAAGAAAAACTTGGTTGGGCTCCAACTATGAGGTTGAAGgtaataatat ... gatgttgtagGATGGACTGAGGATCACATACTTCTGGATTAAGGAGCAGATCGAGAAGGAG
EST: ATACACTTATAAAAGAAAAACTTGGTTGGGCTCCAACTATGAGGTTGAAG GATGGACTGAGGATCACATACTTCTGGATTAAGGAGCAGATCGAGAAAGAGEST: gi|209716887|gb|BW665486.1|BW665486
genomic: ATACACTTATAAAAGAAAAACTTGGTTGGGCTCCAACTATGAGGTTGAAGgtaataatat ... gatgttgtagGATGGACTGAGGATCACATACTTCTGGATTAAGGAGCAGATCGAGAAGGAG
EST: ATACACTTATAAAAGAAAAACTTGGTTGGGCTCCAACTATGAGGTTGAAG GATGGACTGAGGATCACATACTTCTGGATTAAGGAGCAGATCGAGAAGGAGEST: gi|27445968|gb|CA953091.1|CA953091
genomic: ATACACTTATAAAAGAAAAACTTGGTTGGGCTCCAACTATGAGGTTGAAGgtaataatat ... gatgttgtagGATGGACTGAGGATCACATACTTCTGGATTAAGGAGCAGATCGAGAAGGAG
EST: ATACACTTATAAAAGAAAAACTTGGTTGGGCTCCAACTATGAGGTTGAAG GATGGACTGAGGATCACATACTTCTGGATTAAGGAGCAGATCGAGAAGGAG
genomic: ATACACTTATAAAAGAAAAACTTGGTTGGGCTCCAACTATGAGGTTGAAGgtaataatat ... gatgttgtagGATGGACTGAGGATCACATACTTCTGGATTAAGGAGCAGATCGAGAAGGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TATTCACCACATTCCTGGCCCCGAGGGTGTCCGAGGTCGTAATTCAGACAATACACTTATAAAAGAAAAACTTGGTTGGGCTCCAACTATGAGGTTGAAGgtaataatatcatgaattgggcgaacattatcttatttccactctatataatttgttccatgctcatattaagttctgtggaacagtcatagcttatagg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG