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TTCTCCGCTTTGTGACTCCTCTCCCTTCTACATTCTCGATCCCTCGGATCCGTGTTCAACTTCAACTCGCTTCTCGCAACCACCGACTCACTCAACTCAGgtgcattttctcttttcctttcatttctcctcctgattcaactcttctccatgctctttcttcactcatcttctttttttctcttacctgcttcggagtt...
species | Glycine max |
transcript | GLYMA20G36690.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: CGTGTTCAACTTCAACTCGCTTCTCGCAACCACCGACTCACTCAACTCAT GGGCGGGAATTCTCTTACTAAATTGATGACATGGAGCAGTATGAAATACTTEST: gi|209702825|gb|BW660690.1|BW660690
genomic: CGTGTTCAACTTCAACTCGCTTCTCGCAACCACCGACTCACTCAACTCAGgtgcattttc ... atgtatccagGGGCGGGAATTCTCTTACTAAATTGATGACATGGAGCAGTATGAAATACTT
EST: CGTGTTCAACTTCAACTCGCTTCTCGCAACCACCGACTCACTCAACTCAG GGGCGGGAATTCTCTTACTAAATTGATGACATGGAGCAGTATGAAATACTTEST: gi|41146133|gb|CK606344.1|CK606344
genomic: CGTGTTCAACTTCAACTCGCTTCTCGCAACCACCGACTCACTCAACTCAGgtgcattttc ... atgtatccagGGGCGGGAATTCTCTTACTAAATTGATGACATGGAGCAGTATGAAATACTT
EST: CGTGTTCAACTTCAACTCGCTTCTCGCAACCACCGACTCACTCAACTCAG GGGCGGGAATTCTCTTACTAAATTGATGACATGGAGCAGTATGAAATACTTEST: gi|41145529|gb|CK605740.1|CK605740
genomic: CGTGTTCAACTTCAACTCGCTTCTCGCAACCACCGACTCACTCAACTCAGgtgcattttc ... atgtatccagGGGCGGGAATTCTCTTACTAAATTGATGACATGGAGCAGTATGAAATACTT
EST: CGTGTTCAACTTCAACTCGCTTCTCGCAACCACCGACTCACTCAACTCAG GGGCGGGAATTCTCTTACTAAATTGATGACATGGAGCAGTATGAAATACTTEST: gi|193694005|gb|FK630241.1|FK630241
genomic: CGTGTTCAACTTCAACTCGCTTCTCGCAACCACCGACTCACTCAACTCAGgtgcattttc ... atgtatccagGGGCGGGAATTCTCTTACTAAATTGATGACATGGAGCAGTATGAAATACTT
EST: CGTGTTCAACTTCAACTCGCTTCTCGCAACCACCGACTCACTCAACTCAG GGGCGGGAATTCTCTTACTAAATTGATEST: gi|193319807|gb|FK285202.1|FK285202
genomic: CGTGTTCAACTTCAACTCGCTTCTCGCAACCACCGACTCACTCAACTCAGgtgcattttc ... atgtatccagGGGCGGGAATTCTCTTACTAAATTGAT
EST: CAACTTCAACTCGCTTCTCGCAACCACCGACTCACTCAACTCAG GGGCGGGAATTCTCTTACTAAATTGATGACATGGAGCAGTATGAAATACTT
genomic: CAACTTCAACTCGCTTCTCGCAACCACCGACTCACTCAACTCAGgtgcattttc ... atgtatccagGGGCGGGAATTCTCTTACTAAATTGATGACATGGAGCAGTATGAAATACTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTCTCCGCTTTGTGACTCCTCTCCCTTCTACATTCTCGATCCCTCGGATCCGTGTTCAACTTCAACTCGCTTCTCGCAACCACCGACTCACTCAACTCAGgtgcattttctcttttcctttcatttctcctcctgattcaactcttctccatgctctttcttcactcatcttctttttttctcttacctgcttcggagtt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctcctcc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tcttctcc