1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
TAAGGGAGGATGAGGAAGAAACCAATAGATTCCTCAAGTCAAAAAGAGAAGTCCTGATAACTTGTTTAGAAATTGCTGCTCGGCGTTATAAAACACCCTGgtaaatgctcgtgctgttttctattggatgtcttttacacaccttatcatgttgacattatttgttgtcctttctctatccag
species | Glycine max |
transcript | GLYMA20G36470.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: GTCCTGATAACTTGTTTAGAAATTGCTGCTCGGCGTTATAAAACACCCTG GTGTCAAACTGTAATTGATATTTTAGTGAAGCATGCCTTTGATAATGTGGCEST: gi|58019612|gb|CX706354.1|CX706354
genomic: GTCCTGATAACTTGTTTAGAAATTGCTGCTCGGCGTTATAAAACACCCTGgtaaatgctc ... ctctatccagGTGTCAAACTGTAATTGATATTTTAGTGAAGCATGCCTTTGATAATGTGGC
EST: GTCCTGATAACTTGTTTAGAAATTGCTGCTCGGCGTTATAAAACACCCTG GTGTCAAACTGTAATTGATATTTTAGTGAAGCATGCCTTTGATAATGTGGCEST: gi|58019141|gb|CX705883.1|CX705883
genomic: GTCCTGATAACTTGTTTAGAAATTGCTGCTCGGCGTTATAAAACACCCTGgtaaatgctc ... ctctatccagGTGTCAAACTGTAATTGATATTTTAGTGAAGCATGCCTTTGATAATGTGGC
EST: GTCCTGATAACTTGTTTAGAAATTGCTGCTCGGCGTTATAAAACACCCTG GTGTCAAACTGTAATTGATATTTTAGTGAAGCATGCCTTTGATAATGTGGCEST: gi|208112688|gb|GD909263.1|GD909263
genomic: GTCCTGATAACTTGTTTAGAAATTGCTGCTCGGCGTTATAAAACACCCTGgtaaatgctc ... ctctatccagGTGTCAAACTGTAATTGATATTTTAGTGAAGCATGCCTTTGATAATGTGGC
EST: GTCCTGATAACTTGTTTAGAAATTGCTGCTCGGCGTTATAAAACACCCTG GTGTCAAACTGTAATTGATATTTTAGTGAAGCATGCCTTTGATAATGTGGCEST: gi|208074602|gb|GD868267.1|GD868267
genomic: GTCCTGATAACTTGTTTAGAAATTGCTGCTCGGCGTTATAAAACACCCTGgtaaatgctc ... ctctatccagGTGTCAAACTGTAATTGATATTTTAGTGAAGCATGCCTTTGATAATGTGGC
EST: GTCCTGATAACTTGTTTAGAAATTGCTGCTCGGCGTTATAAAACACCCTG ATGTCAAACTGTAATTGGTATTTTAGTGAAGCATGCCTTTGATAATGTGGCEST: gi|58022715|gb|CX709456.1|CX709456
genomic: GTCCTGATAACTTGTTTAGAAATTGCTGCTCGGCGTTATAAAACACCCTGgtaaatgctc ... ctctatccagGTGTCAAACTGTAATTGATATTTTAGTGAAGCATGCCTTTGATAATGTGGC
EST: GTCCTGATAACTTGTTTAGAAATTGCTGCTCGGCGTTATAAAACACCCTG GTGTCAAACTGTAATTGATATTTTAGTGAAGCATGCCTTTGATAATGTGGC
genomic: GTCCTGATAACTTGTTTAGAAATTGCTGCTCGGCGTTATAAAACACCCTGgtaaatgctc ... ctctatccagGTGTCAAACTGTAATTGATATTTTAGTGAAGCATGCCTTTGATAATGTGGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TAAGGGAGGATGAGGAAGAAACCAATAGATTCCTCAAGTCAAAAAGAGAAGTCCTGATAACTTGTTTAGAAATTGCTGCTCGGCGTTATAAAACACCCTGgtaaatgctcgtgctgttttctattggatgtcttttacacaccttatcatgttgacattatttgttgtcctttctctatccag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT