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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTCAGAGGTGGCCAGCTTTGGGGGACCGATGTGTACACATACGATTCAGATCTTGTTGCTGgtatatgtctttacaaaaagatgcatttgccttttcttataaatgacaggtcatatatttggcgatagtatggataattgcaattttgttgcacctgcacag

Basic information

species Glycine max
transcript GLYMA20G35720.1
intron # 4
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA20G35720.1 (Glycine max), 5'ss of exon 4
lower sequence: AT5G08450.1 (Arabidopsis thaliana), 5'ss of exon 5
GTCAGAGGTGGCCAGCTTTGGGGGACCGATGTGTACACATACGATTCAGATCTTGTTGCTGgtatatgtctttacaaaaag-atgcatttgccttttcttataaatgacaggtcatatatttggcgatagtatggataattgcaattttgttgcacctgcacag
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GTAAGAGGTGGCCAACTATGGGGAACAGATATATACACAGACGATTCCGATCTTGTTGCTGgtatgtaccctaatgaatcttatgcaattattatctttgtttg--gcccgaacatgacattgattctggtct----acctgtcatctag--------------