Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|193640440|gb|FK592783.1|FK592783EST: CTGTTGGTAGCAACGTCGAAGAGCTCGTCTACAAGAATATACGATTTGAG GTCTGGGATCTTGGTGGACAAGAAAGATTGAGGACATCATGGGCAACATAT
genomic: CTGTTGGTAGCAACGTCGAAGAGCTCGTCTACAAGAATATACGATTTGAGgtcccttcac ... tttatttcagGTCTGGGATCTTGGTGGACAAGAAAGATTGAGGACATCATGGGCAACATAT
EST:
gi|37996133|gb|CF807722.1|CF807722EST: CTGTTGGTAGCAACGTCGAAGAGCTCGTCTACAAGAATATACGATTTGAG GTCTGGGATCTTGGTGGACAAGAAAGATTGAGGACATCATGGGCAACATAT
genomic: CTGTTGGTAGCAACGTCGAAGAGCTCGTCTACAAGAATATACGATTTGAGgtcccttcac ... tttatttcagGTCTGGGATCTTGGTGGACAAGAAAGATTGAGGACATCATGGGCAACATAT
EST:
gi|192330253|gb|FK020553.1|FK020553EST: CTGTTGGTAGCAACGTCGAAGAGCTCGTCTACAAGAATATACGATTTGAG GTCTGGGATCTTGGTGGACAAGAAAGATTGAGGACATCATGGGCAACATAT
genomic: CTGTTGGTAGCAACGTCGAAGAGCTCGTCTACAAGAATATACGATTTGAGgtcccttcac ... tttatttcagGTCTGGGATCTTGGTGGACAAGAAAGATTGAGGACATCATGGGCAACATAT
EST:
gi|208289119|gb|GE085412.1|GE085412EST: ATACGATTTGAG GTCTGGGATCTTGGTGGACAAGAAAGATTGAGGACATCATGGGCAACATAT
genomic: ATACGATTTGAGgtcccttcac ... tttatttcagGTCTGGGATCTTGGTGGACAAGAAAGATTGAGGACATCATGGGCAACATAT
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CACTACCCTTTATAAATTGCATCTGGGTGAGGTTGTAACTACCAACCCTACTGTTGGTAGCAACGTCGAAGAGCTCGTCTACAAGAATATACGATTTGAGgtcccttcacttatcactctactactttatttattcattcattttgttttaaggtgttgatcttgcttcaagggattaatgtttttttttttttgttgct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAGCT