1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
TGAAACTTAATCTTCATTCCAAGGAAGATCTGAATGAGAATCTGAAGAATGTCTCAAAGGAGAAGACCCTCCTTAAGGATCCTGCCAAGCCACCGGCTAAgtaagtcattttctcacttttcttttataattaaaggcctttgcatgcttctgttcatcttttctttcttggacctagcttcaatagtttgtttgattcc...
species | Glycine max |
transcript | GLYMA20G35270.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: AGCCACCGGCTAA GGCTCAAGTGGTTGGTTGGCCACCAGTGAGGTCATACAGGAAGAACATGATEST: gi|12689271|gb|BG155607.1|BG155607
genomic: AGCCACCGGCTAAgtaagtcatt ... aatatttcagGGCTCAAGTGGTTGGTTGGCCACCAGTGAGGTCATACAGGAAGAACATGAT
EST: GTCTCAAAGGAGAAGACCCTGCTTAAGGATCCTGCCAAGCCACCGGCTAA GGCTCAAGTGGTTGGTTGGCCACCAGTGAGGTCATACAGGAAGAACATGAT
genomic: GTCTCAAAGGAGAAGACCCTCCTTAAGGATCCTGCCAAGCCACCGGCTAAgtaagtcatt ... aatatttcagGGCTCAAGTGGTTGGTTGGCCACCAGTGAGGTCATACAGGAAGAACATGAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGAAACTTAATCTTCATTCCAAGGAAGATCTGAATGAGAATCTGAAGAATGTCTCAAAGGAGAAGACCCTCCTTAAGGATCCTGCCAAGCCACCGGCTAAgtaagtcattttctcacttttcttttataattaaaggcctttgcatgcttctgttcatcttttctttcttggacctagcttcaatagtttgtttgattcc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAA