Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|209714633|gb|BW654045.1|BW654045EST: TCGCTGCTCACTGTAGCCATGGCTTTCAGAGTAGGAGGAGCGGGAGGG GGAAATGCCTCTTCTGGCATGGGTGTTGCTGAGCATAGTGTAAACACCTTC
genomic: TCGCTGCTCACTGTAGCCATGGCTTTCAGAGTAGGAGGAGCGGGAGGGgtaagctttt ... ttcaatgtagGGAAATGCCTCTTCTGGCATGGGTGTTGCTGAGCATAGTGTAAACACCTTC
EST:
gi|21887631|gb|BQ740844.1|BQ740844EST: GCTGCTCACTGTAGCCATGGCTTTCAGAGTAGGAGGAGCGGGAGGG GGAAATGCCTCTTCTGGCATGGGTGTTGCTGAGCATAGTGTAAACACCTTC
genomic: GCTGCTCACTGTAGCCATGGCTTTCAGAGTAGGAGGAGCGGGAGGGgtaagctttt ... ttcaatgtagGGAAATGCCTCTTCTGGCATGGGTGTTGCTGAGCATAGTGTAAACACCTTC
EST:
gi|254336711|gb|GR842890.1|GR842890EST: GCTGCTCACTGTAGCCATGGCTTTCAGAGTAGGAGGAGCGGGAGGG GGAAATGCCTCTTCTGGCATGGGTGTTGCTGAGCATAGTGTAAACACCTTC
genomic: GCTGCTCACTGTAGCCATGGCTTTCAGAGTAGGAGGAGCGGGAGGGgtaagctttt ... ttcaatgtagGGAAATGCCTCTTCTGGCATGGGTGTTGCTGAGCATAGTGTAAACACCTTC
EST:
gi|15814871|gb|BI787146.1|BI787146EST: CTCACTGTAGCCATGGCTTTCAGAGTAGGAGGAGCGGGAGGG GGAAATGCCTCTTCTGGCATGGGTGTTGCTGAGCATAGTGTAAACACCTTC
genomic: CTCACTGTAGCCATGGCTTTCAGAGTAGGAGGAGCGGGAGGGgtaagctttt ... ttcaatgtagGGAAATGCCTCTTCTGGCATGGGTGTTGCTGAGCATAGTGTAAACACCTTC
EST:
gi|7925293|gb|AW831319.1|AW831319EST: GCTGCTCACTGTAGCCATGGCTTTCAGAGTAGGAGGAGCGGGAGGG GGAAATGCCTCTTCTGGCATGGGTGTTGCTGAGCATAGTGTAAACACCTTC
genomic: GCTGCTCACTGTAGCCATGGCTTTCAGAGTAGGAGGAGCGGGAGGGgtaagctttt ... ttcaatgtagGGAAATGCCTCTTCTGGCATGGGTGTTGCTGAGCATAGTGTAAACACCTTC
EST:
gi|10846286|gb|BF069209.1|BF069209EST: TGTAGCCATGGCTTTCAGAGTAGGAGGAGCGGGAGGG GGAAATGCCTCTTCTGGCATGGGTGTTGCTGAGCATAGTGTAAACACCTTC
genomic: TGTAGCCATGGCTTTCAGAGTAGGAGGAGCGGGAGGGgtaagctttt ... ttcaatgtagGGAAATGCCTCTTCTGGCATGGGTGTTGCTGAGCATAGTGTAAACACCTTC
EST:
gi|14258838|gb|BG881746.1|BG881746EST: GCTGCTCACTGTAGCCATGGCTTTCAGAGTAGGAGGAGCGGGAGGG GGAAATGCCTCTTCTGGCATGGGTGTTGCTGAGCATAGTGTAAACACCTTC
genomic: GCTGCTCACTGTAGCCATGGCTTTCAGAGTAGGAGGAGCGGGAGGGgtaagctttt ... ttcaatgtagGGAAATGCCTCTTCTGGCATGGGTGTTGCTGAGCATAGTGTAAACACCTTC
atgc intronic sequence ATGC exonic sequenceIntronic sequence truncated to 55 bases.gtattgaatttgaaaaggactagtgtttagaatttgatgtgtggcttcaatgtagGGAAATGCCTCTTCTGGCATGGGTGTTGCTGAGCATAGTGTAAACACCTTCCTGGAATTGCAGAGGAAGAAAGTTCATCGCTATGTGATTTTTAAAATTG
atttgat putative branch site (score: 5)
aatttgaaaa TA-rich tract