1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GAGACAAGGATGTTTGGGTGATGAATGTTGTACCTCAAGATGGACCAAACACACTTAAGCTCATATATGACAGAGGCCTCATTGGAACTACTCATGACTGgtattgaagctagattgcttgaattataaatctattggttctttgataacttgccgtgcatttgaggcatttcatttttataacctaataatttcttata...
species | Glycine max |
transcript | GLYMA20G35120.3 |
intron # | 7 |
splice site | 5' |
intron type | U2 |
EST: ACACTTAAGCTCATATATGACAGAGGCCTCATTGGAACTACTCATGACTG GTGTGAAGCATTTTCGACATACCCCGGGACATACGATTTACTTCATGCATGEST: gi|18732583|gb|BM527123.1|BM527123
genomic: ACACTTAAGCTCATATATGACAGAGGCCTCATTGGAACTACTCATGACTGgtattgaagc ... tcttaaacagGTGTGAAGCATTTTCGACATACCCCCGGACATACGATTTACTTCATGCATG
EST: ACACTTAAGCTCATATATGACAGAGGCCTCATTGGAACTACTCATGACTG GTGTGAAGCATTTTCGACATACCCCCGGACATACGATTTACTTCATGCATGEST: gi|22933773|gb|BU550912.1|BU550912
genomic: ACACTTAAGCTCATATATGACAGAGGCCTCATTGGAACTACTCATGACTGgtattgaagc ... tcttaaacagGTGTGAAGCATTTTCGACATACCCCCGGACATACGATTTACTTCATGCATG
EST: ACACTTAAGCTCATATATGACAGAGGCCTCATTGGAACTACTCATGACTG GTGTGAAGCATTTTCGACATACNNNCGGACATACGATTTACTTCATGCATGEST: gi|15337283|gb|BI497939.1|BI497939
genomic: ACACTTAAGCTCATATATGACAGAGGCCTCATTGGAACTACTCATGACTGgtattgaagc ... tcttaaacagGTGTGAAGCATTTTCGACATACCCCCGGACATACGATTTACTTCATGCATG
EST: ACACTTAAGCTCATATATGACAGAGGCCTCATTGGAACTACTCATGACTG GTGTGAAGCATTTTCGACATACCCCCGGACATACGATTTACTTCATGCATGEST: gi|6848087|gb|AW350377.1|AW350377
genomic: ACACTTAAGCTCATATATGACAGAGGCCTCATTGGAACTACTCATGACTGgtattgaagc ... tcttaaacagGTGTGAAGCATTTTCGACATACCCCCGGACATACGATTTACTTCATGCATG
EST: ACACNNNAGCTCATATATGACAGAGNNNNCATTGGAACTACTCATGACTG GTGTGAAGCATTTTCGACATACCCCCGGACATACGATTTACTTCATGCATGEST: gi|21678269|gb|BQ630620.1|BQ630620
genomic: ACACTTAAGCTCATATATGACAGAGGCCTCATTGGAACTACTCATGACTGgtattgaagc ... tcttaaacagGTGTGAAGCATTTTCGACATACCCCCGGACATACGATTTACTTCATGCATG
EST: ACACTTAAGCTCATATATGACAGAGGCCTCATTGGAACTACTCATGACTG GTGTGAAGCATTTTCGACATACCCCCGGACATACGATTTACTTCATGCATGEST: gi|193545564|gb|FK501215.1|FK501215
genomic: ACACTTAAGCTCATATATGACAGAGGCCTCATTGGAACTACTCATGACTGgtattgaagc ... tcttaaacagGTGTGAAGCATTTTCGACATACCCCCGGACATACGATTTACTTCATGCATG
EST: ACACTTAAGCTCATATATGACAGAGGCCTCATTGGAACTACTCATGACTG GTGTGAAGCATTTTCGACATACCCCCGGACATACGATTTACTTCATGCATGEST: gi|10843348|gb|BF066651.1|BF066651
genomic: ACACTTAAGCTCATATATGACAGAGGCCTCATTGGAACTACTCATGACTGgtattgaagc ... tcttaaacagGTGTGAAGCATTTTCGACATACCCCCGGACATACGATTTACTTCATGCATG
EST: ACACTTAAGCTCATATATGACAGAGGCCTCATTGGAACTACTCATGACTG GTGTGAAGCATTTTCGACATACCCCCGGACATACGATTTACTTCATGCATGEST: gi|6725398|gb|AW309797.1|AW309797
genomic: ACACTTAAGCTCATATATGACAGAGGCCTCATTGGAACTACTCATGACTGgtattgaagc ... tcttaaacagGTGTGAAGCATTTTCGACATACCCCCGGACATACGATTTACTTCATGCATG
EST: CAGA-GCCTCATTGGAACTACTCATGANTG GTGTGTAGCATTTTCGACATACCCCCGGACATACGATTTACTTCATGCATG
genomic: CAGAGGCCTCATTGGAACTACTCATGACTGgtattgaagc ... tcttaaacagGTGTGAAGCATTTTCGACATACCCCCGGACATACGATTTACTTCATGCATG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGACAAGGATGTTTGGGTGATGAATGTTGTACCTCAAGATGGACCAAACACACTTAAGCTCATATATGACAGAGGCCTCATTGGAACTACTCATGACTGgtattgaagctagattgcttgaattataaatctattggttctttgataacttgccgtgcatttgaggcatttcatttttataacctaataatttcttata
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