1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
TGTGCTTATAATTCTGCAAAATCTAAAAACAAGTTTCACCTTTGGGGGAGTCATTGGAGACATGGAGATTCATTGCTGTTTGCCCTTGCTTGTGCACAGgtattaataaaacctcaatctgacttttcatgctagggttttattcttaactatcacccttgtaatctttatgtgtgcctgataattgatatcagtataa...
species | Glycine max |
transcript | GLYMA20G34070.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: GTCATTGGAGACATGGAGATTCATTGCTGTTTGCCCTTGCTTGTGCACAG GTTATGTATGCCTTTGTAATGCGTCCTGAGAGCTTGCCAAAATCCTATCAAEST: gi|7796437|gb|AW781834.1|AW781834
genomic: GTCATTGGAGACATGGAGATTCATTGCTGTTTGCCCTTGCTTGTGCACAGgtattaataa ... tgtatttcagGTTATGTATGCCTTTGTAATGCGTCCTGAGAGCTTGCCAAAATCCTATCAA
EST: GGAGATTCATTGCTGTTTGCCCTTGCTTGTGCACAG GTTATGTATGCCTTTGTAATGCGTCCTGAGAGCTTGCCAAAATCCTATCAA
genomic: GGAGATTCATTGCTGTTTGCCCTTGCTTGTGCACAGgtattaataa ... tgtatttcagGTTATGTATGCCTTTGTAATGCGTCCTGAGAGCTTGCCAAAATCCTATCAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGTGCTTATAATTCTGCAAAATCTAAAAACAAGTTTCACCTTTGGGGGAGTCATTGGAGACATGGAGATTCATTGCTGTTTGCCCTTGCTTGTGCACAGgtattaataaaacctcaatctgacttttcatgctagggttttattcttaactatcacccttgtaatctttatgtgtgcctgataattgatatcagtataa
- - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT