Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAGTCATTCTCCGAAGTAGCCATAATTCTTATGTGCATAAGCTTGTCAAAATCAATAGACCCATTTTGCGCATTCCCACACTCGCCATTCATCTTGACCGgtatatatattatatagactttatgtcattcatcattcatcattcatcacacacaccatatgattgttaatttcatcacgcgctttgtagacttgttaga...

Basic information

species Glycine max
transcript GLYMA20G32790.1
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|23728172|gb|BU762132.1|BU762132
EST:     ATCAATAGACCCATTTTGCGCATTCCCACACTCGCCATTCATCTTGACCG                         CACAGTGAACCAGGATGGGTTTAAACCAAATCTAGAGACTCATCTTCATCC
genomic: ATCAATAGACCCATTTTGCGCATTCCCACACTCGCCATTCATCTTGACCGgtatatatat ... tattgtttagCACAGTGAACCAGGATGGGTTTAAACCAAATCTAGAGACTCATCTTCATCC
EST: gi|13180749|gb|BG352089.1|BG352089
EST:     ATCAATAGACCCATTTTGCGCATTCCCACACTCGCCATTCATCTTGACCG                         CACAGTGAACCAGGATGGGTTTAAACCAAATCTAGAGACTCATCTTCATCC
genomic: ATCAATAGACCCATTTTGCGCATTCCCACACTCGCCATTCATCTTGACCGgtatatatat ... tattgtttagCACAGTGAACCAGGATGGGTTTAAACCAAATCTAGAGACTCATCTTCATCC
EST: gi|13180804|gb|BG352144.1|BG352144
EST:     ATCAATAGACCCATTTTGCGCATTCCCACACTCGCCATTCATCTTGACCG                         CACAGTGAACCAGGATGGGTT-AAACCAAATCTAGAGACTCATCTTCATCC
genomic: ATCAATAGACCCATTTTGCGCATTCCCACACTCGCCATTCATCTTGACCGgtatatatat ... tattgtttagCACAGTGAACCAGGATGGGTTTAAACCAAATCTAGAGACTCATCTTCATCC