1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GTTTTAAATACCTCTAAAGGTTCTATAATAATAGAACTGTACAAGGAAAGTGCTCCTGAAGTTGTTGATGAATTCATTGACTTATGgtgagtacttgtttttcctatgaaattataatttgaaggctgttagatggtttagggtttgattcttggagactctatttttgtttggacttgtggctgg...
species | Glycine max |
transcript | GLYMA20G32530.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: GGAAAGTGCTCCTGAAGTTGTTGATGAATTCATTGACTTATG TCAAAAAGGACACTTCAAGGGGATGCTTTTTCACAAAGTAATTAAGCACTAEST: gi|208266975|gb|GE062342.1|GE062342
genomic: GGAAAGTGCTCCTGAAGTTGTTGATGAATTCATTGACTTATGgtgagtactt ... tttcttgcagTCAAAAAGGACACTTCAAGGGGATGCTTTTTCACAAAGTAATTAAGCACTA
EST: CTGTACAAGGAAAGTGCTCCTGAAGTTGTTGATGAATTCATTGACTTATG TCAAAAAGGGCACTTCAAGGGGATGCTTTTTCACAAAGTAATTAAGCACTAEST: gi|208278463|gb|GE077108.1|GE077108
genomic: CTGTACAAGGAAAGTGCTCCTGAAGTTGTTGATGAATTCATTGACTTATGgtgagtactt ... tttcttgcagTCAAAAAGGACACTTCAAGGGGATGCTTTTTCACAAAGTAATTAAGCACTA
EST: CTGTACAAGGAAAGTGCTCCTGAAGTTGTTGATGAATTCATTGACTTATG TCAAAAAGGACACTTCAAGGGGATGCTTTTTCACAAAGTAATTAAGCACTA
genomic: CTGTACAAGGAAAGTGCTCCTGAAGTTGTTGATGAATTCATTGACTTATGgtgagtactt ... tttcttgcagTCAAAAAGGACACTTCAAGGGGATGCTTTTTCACAAAGTAATTAAGCACTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTTTTAAATACCTCTAAAGGTTCTATAATAATAGAACTGTACAAGGAAAGTGCTCCTGAAGTTGTTGATGAATTCATTGACTTATGgtgagtacttgtttttcctatgaaattataatttgaaggctgttagatggtttagggtttgattcttggagactctatttttgtttggacttgtggctgg
- - - - - - - - - - - - - - - - - - - - - AAGGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG