1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
ACCAGGTGGTTTTAAAGTGCTCAAGTTTCACTACCACGCCCACTGTTAGATCTTCTCCTTTCTCACCTCTTCCAACAATACATCTTCTGCCTACTGCTAGgtactccctttgattttccctttttcattttccatttgttctcttaaagttttcatttttactctgattcttaatcacccacatcattgtttgttctacc...
species | Glycine max |
transcript | GLYMA20G31830.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: ATACANCTTCTGCCTACTGCTAG GTGAAATGCAGAATCCAGATGCAAATCAACTTCCCGAAGTTGATTCGTTGCEST: gi|208213179|gb|GE015024.1|GE015024
genomic: ATACATCTTCTGCCTACTGCTAGgtactccctt ... tgagatgtagGTGAAATGCAGAATCCAGATGCAAATCAACTTCCCGAAGTTGATTCGTTGC
EST: TCTTCTCCTTTCTCACCTCTTCCAACAATACATCTTCTGCCTACTGCTAG GTGAAATGCAGAATCCAGATGCAAATCAACTTCCCGAAGTTGATTCGTTGCEST: gi|207796169|gb|GD771856.1|GD771856
genomic: TCTTCTCCTTTCTCACCTCTTCCAACAATACATCTTCTGCCTACTGCTAGgtactccctt ... tgagatgtagGTGAAATGCAGAATCCAGATGCAAATCAACTTCCCGAAGTTGATTCGTTGC
EST: TCTTCTCCTTTCTCACCTCTTCCAACAATACATCTTCTGCCTACTGCTAG GTGAAATGCAGAATCCAGATGCAAATCAACTTCCCGAAGTTGATTCGTTGC
genomic: TCTTCTCCTTTCTCACCTCTTCCAACAATACATCTTCTGCCTACTGCTAGgtactccctt ... tgagatgtagGTGAAATGCAGAATCCAGATGCAAATCAACTTCCCGAAGTTGATTCGTTGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACCAGGTGGTTTTAAAGTGCTCAAGTTTCACTACCACGCCCACTGTTAGATCTTCTCCTTTCTCACCTCTTCCAACAATACATCTTCTGCCTACTGCTAGgtactccctttgattttccctttttcattttccatttgttctcttaaagttttcatttttactctgattcttaatcacccacatcattgtttgttctacc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -cacccac